Cbn-bre-3, gene3767 (gene) Nannochloropsis gaditana

Overview
NameCbn-bre-3
Unique Namegene3767
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:409007..413590 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g211
Gene biotypeprotein_coding
GeneCbn-bre-3
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:409007..413590 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03030NO08G03030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3915rna3915-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3915rna3915Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3915

>rna3915-protein ID=rna3915-protein|Name=rna3915|organism=Nannochloropsis gaditana|type=polypeptide|length=967bp
MKGRGVEYRTAPTSPSKADMQDALRGLKGLTRFVDTPSKSAASFQCPKEL
YAVRILVVLHLVLHFCYQTFGPDVFQNVFVVRLAEWGAIQYSTLFCLEGM
ILAIRYGRVPGGEKEEEDEKDAQAPEAIAFFKRHALEIYPLYLIGVAATA
SFSLLTTGTGSLRRFLLTASGLDAWTLGSPDLLSRDPTWLVATLLFYLSF
FPALLKLALPASRGTLLGVMATAWASTAVVPLTFLGFDLELGAAPHLFTL
GTTFPLMHAASFVFGVTLGLYFLKLDREAVAGVSQSFLGTAAAAGLLFFF
LSTDMFEGRMLLWCYDGLFLGFMGVILLLAAIGKDTFLGIALRVKFLSEV
LGPAALTVYLLQGFFLGVAGSVVEAETSTLVWLAFWAALLTAGFFLHRSY
QAVYLQQMLPLILAGEESAATAGRGQPTPPHRPSSPASTASSSSTSSPIA
GASAVFQDDLSSIEDHGAEYPIQGWFWHKSFLMAAFRLACYYGSMALTIF
FYMTLALRFDWKGFASVYDMPVANAFVNFLKYCALLSLPSLTFSMVGHIL
FPPVLRKRTPSLEALKKAFKHKVFFRIVTRGKHPNLVRSHVLHASNVLRA
ALPHSQFCLEVATDAPLDLDTFCPGMATELLLPKNYAPVGGAKFKARALQ
YAIEASAAEPGDWIVHLDEETRFDAETVRGVLAHCVAEDEAITRGAKIYG
NIGQGVILYGTQEPDNWLTTLADSVRVGDDFGKFRIQYELHEPLIGMHGS
FVVSQNAVEKLVTFDHGMEGSITEDAYFALVAQVKGIKFSWIDSFMYEQS
PFSCIDFMHQRCRWFAGLWLIVLSRRIPFLNRAVLLFFMATWAATPLIWL
AMTLCMCVASSVPYWFRACIGLISGMSTWGYILGFAFTFKARDGSARLLL
LFGLQLLLQPLFAAMELSGVVLGIVAPPTQGFHIVQKEGTKVQKSTGAMS
RNSSLASIGKLNSVDHV
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Synonyms
Publications