Naga_100018g28, gene3729 (gene) Nannochloropsis gaditana

Overview
NameNaga_100018g28
Unique Namegene3729
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:298856..303071 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100018g28
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:298856..303071 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0009056catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03390NO08G03390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3877rna3877-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3877rna3877Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3877

>rna3877-protein ID=rna3877-protein|Name=rna3877|organism=Nannochloropsis gaditana|type=polypeptide|length=1006bp
MPRAVLPIKVAETGVVVNIELHNPYQDDSVIDLKHLLASATQVAPEDQIL
LIGPPFKPLKRLDPPLTFSSSSATDEEVAATQSELSQAQPLSSSSSSLST
SSPSSSASFSSSASPPARSIYLYDRRTLDAPSTPSSALPAPSPHLPVSLP
DIPSSPSTPASPRLQSLIHQAVGQGLLSQTLSKYERLVGGNVAKGHAYQD
RAQRLVEAAVRAQEEVRIQRDAGQVALTNLRDHFRAISRDADKLSRRHEK
QAEKHRKLLENFNPNLRVLEQRPLHPALGTALRDSVREERREGGREGGRE
GGGGTWSSSSATGSVTELSVSPLEGGSSSSRVSPSPPGVECEALRKACSA
SSSSITLYDTVPVGRVTEWYRECGETRERLDSWMRDVQASLRDLQAGVEA
PSALRVTADMGTAAQEEVDEITRRLSEQETAVALLEGGHAEMLERIETSL
GGEAAGPDALPSSSPSSSAKLVDTCQWLDGLLTRQAGVLVSLDSTDETMV
GRLKAVFAQKERTARWLRGLLAEISRLQGDIQSLRVNLSLGEQAMQAERR
HFYHLEHLEHLPTAYEALLLELARRRAYARLFDLKVKSAVDGIARFREEE
IQARADFLRRHASHLMPVFSQIFAGMQDRPPHFQPKPLAMEARLPVVRIA
ELLVGDEGEKEGNEGDEEEEDELLKGYVSCLARVSREEGADREEEGKEAG
KDGGKEIMPGAESTPTLEELEERCMTQDLVIAQLQTKVQSLNLHHRAPPG
RKKSGDAGVGGDGEGAGARLQRVEEENSLLRSCMETVLNVMEEMRQCAAS
TGGSGSGCEAEREQAVTRAREGGREAGKGAGSPSPSSSPQHLVNAVDDTA
SFVKARLRDLQAELQASRGEGKERGKEGVVPCTNMSPSTPSLSISPAPSS
PGSHAKISFREFNVGDVALFLPTSHQGENRVYLAFHTNCPHRYLSHESLE
SLRGGREGGGRFPDFILGKIVYVEEMVAKEGEPASNPYHLQAGVKFYVLH
VSNEVV
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Synonyms
Publications