Naga_100003g162, gene323 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g162
Unique Namegene323
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:824563..829846 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g162
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:824563..829846 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03230NO02G03230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna335rna335-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna334rna334-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna335rna335Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna334rna334Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna335

>rna335-protein ID=rna335-protein|Name=rna335|organism=Nannochloropsis gaditana|type=polypeptide|length=1185bp
MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPT
RIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGG
LSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMW
PLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVV
DLDLNQVYPASGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQL
SKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPASP
LILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDP
FSQARRSLQVGAGEAGVMTEEDWDAIRDAFLGFFLAILREYRKFLVFPSK
EDPKPKLEFRRTDFVASHPSEWAPFLEEFSRTQALQSFLDARLQPDPEDV
GEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLV
ALQPDVSSLPDEPFIYDGFPMLQEKWYTPPRPVNDLAGRGPEDDGRGWVR
RRGRRRRGIKKRNHILRFKSDHIPWDPATSVFSTFLMTFCLTIGRDLQQQ
HDVSFDAIQRQASEHLVTSKDATSDGESVIGPEGTNDPSVDRRSVTEREH
GKQEEGEEGKGEPAIEELDKRHYELGSDSEHKISHQFSAAASFRLRPRMR
CLSEDKREERVHAAIGKLTIAFDVLKRMRAQRTPADEWIYRCLIDAASRL
GAVDMALQALTEMNEAGFAVDASVVSTLLSGAASSQASQALSLLDWNKIR
QRNDGRSGSSGGSGTGHYSVHGSQKHGARLSSGTPKVFKEALSAFRKIGT
PGQSGFWSLSNGGNGGSADGRNQTGVGRGGEVDNACAGNAGVGNQGSWER
QSTRGTQVIANPVSLPFELILDESARRDAEARAFQSDSNFGSGAKGGERE
GANEGEAVSDSKSDATAYNTPSINFQVKYGESLLNVLFPNLALDVDSETC
PQCNSRLSAAEIQSGWLPDPNNYTTSCPLCETAREAKIKEQQRAIQQHQQ
QQGMNHLLDFKSLDLSGVDRDRRSSVISRPIPPPPVRRFVARFSVHCTAS
DWIGSTGPGTPLWCEYLSPWVLRKEIQTILLNDGIDSILSAAFRKSSAAS
STIFWNLILWYRDFALPVAFLLQNSVEGAATAPLI
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protein sequence of rna334

>rna334-protein ID=rna334-protein|Name=rna334|organism=Nannochloropsis gaditana|type=polypeptide|length=1185bp
MQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPT
RIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPVLWSGG
LSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEFLTACMW
PLAYPHVFIPILPRQCLYLCANSPVPFLLGCHTDSFRVVADQLPDTVSVV
DLDLNQVYPASGVSLPNLPERRQAKLLRAIHEHANLFEAQQRYLQKQKQL
SKEQRRVPPTPSHSALPPAAPPPPLVFSVTSTPSSTTARTAAATRLPASP
LILSQSRPPPCLEPASHLGASTTSESSLESPLSPLPSPSPHRFLRNLDDP
FSQARRSLQVGAGEAGVMTEEDWDAIRDAFLGFFLAILREYRKFLVFPSK
EDPKPKLEFRRTDFVASHPSEWAPFLEEFSRTQALQSFLDARLQPDPEDV
GEISLFDELIEARKRGKPRFSMGAIGGNRRQASFRRPVHFRHPKEIKTLV
ALQPDVSSLPDEPFIYDGFPMLQEKWYTPPRPVNDLAGRGPEDDGRGWVR
RRGRRRRGIKKRNHILRFKSDHIPWDPATSVFSTFLMTFCLTIGRDLQQQ
HDVSFDAIQRQASEHLVTSKDATSDGESVIGPEGTNDPSVDRRSVTEREH
GKQEEGEEGKGEPAIEELDKRHYELGSDSEHKISHQFSAAASFRLRPRMR
CLSEDKREERVHAAIGKLTIAFDVLKRMRAQRTPADEWIYRCLIDAASRL
GAVDMALQALTEMNEAGFAVDASVVSTLLSGAASSQASQALSLLDWNKIR
QRNDGRSGSSGGSGTGHYSVHGSQKHGARLSSGTPKVFKEALSAFRKIGT
PGQSGFWSLSNGGNGGSADGRNQTGVGRGGEVDNACAGNAGVGNQGSWER
QSTRGTQVIANPVSLPFELILDESARRDAEARAFQSDSNFGSGAKGGERE
GANEGEAVSDSKSDATAYNTPSINFQVKYGESLLNVLFPNLALDVDSETC
PQCNSRLSAAEIQSGWLPDPNNYTTSCPLCETAREAKIKEQQRAIQQHQQ
QQGMNHLLDFKSLDLSGVDRDRRSSVISRPIPPPPVRRFVARFSVHCTAS
DWIGSTGPGTPLWCEYLSPWVLRKEIQTILLNDGIDSILSAAFRKSSAAS
STIFWNLILWYRDFALPVAFLLQNSVEGAATAPLI
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Synonyms
Publications