Naga_100003g173, gene312 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g173
Unique Namegene312
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:799290..802532 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g173
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:799290..802532 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
GO:0016020membrane
GO:0009579thylakoid
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
GO:0009416response to light stimulus
GO:0016043cellular component organization
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03120NO02G03120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna323rna323-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna323rna323Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna323

>rna323-protein ID=rna323-protein|Name=rna323|organism=Nannochloropsis gaditana|type=polypeptide|length=794bp
MGLNLRSVMKRARRCVPVALLYLVMSQEALAVRRNIQSTKAFIGNTRLAR
TSEMARRSSRSSNSFGSRVLAMKEGPCVNGVCPSKATALAMTALGLFSGL
APQAAQAADAPPALQQSMNRQAGVPSLVRYSDFLDMVEKGQIEKVTFSAD
GQKLVATDTDGQRYRLDALPNDPDLLATLTQKMVDVTVLPEQPKADGFNF
FQSILFPGLLFLGLFFLARRGGSGAGGGAGPGGMPGMGGQGPMEFSKSSA
KIMLTPDTGVTFDNVAGCDGAKMELTEVVDFLKNPEKYTDVGAKIPRGVI
LDGPPGTGKTLLAKAVAGESGVPFISAAGSEFVEMFVGVGASRVRDMFEQ
AKKNAPCIIFIDEIDAVGRQRGAGFAGGNDEREQTLNQLLTEMDGFEGNP
GIIVIAATNRADVLDQALLRPGRFDRRVTVDLPDFKGRTAILKVHSKGKP
LAPDVDLESISRRTPGFSGASLQNIMNEAAISAARADKSYVGWEEIDNAV
DRVLVGLEKRGADVPALRKELVAFHEAGHAIVGAVIPDYDMVQKVTIIPR
SNGAGGLTFFAPNEDRLESSMYTRQYLEAQLAVALGGRLAEELIFGADQV
TTGAMNDIQQVANIAKRMVTQFGMSDTVGPLGIGESGPVFMGRRMAEGVT
EWSQSLKKEVDDEVERLVSNAYNLAKDVLQKNMDLLYALADRLVEQETVT
AEEFAFMLLEYQVQMVPYAVYPNDSKMGDLPYYPDQMPGWKSGTNIRFSR
EVKGRMESEADKVLGASRLIGAGGGGGASVAPAAPASSPDAPAA
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Synonyms
Publications