Naga_100015g26, gene3011 (gene) Nannochloropsis gaditana

Overview
NameNaga_100015g26
Unique Namegene3011
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:801257..807506 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100015g26
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:801257..807506 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL129ngnoL129Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02580NO09G02580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3133rna3133-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3133rna3133Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3133

>rna3133-protein ID=rna3133-protein|Name=rna3133|organism=Nannochloropsis gaditana|type=polypeptide|length=1843bp
MAEDERSTLLPPLPRHPVALTSLKSPLCPYAVDLEVSPPARRRRPPNEFV
SKRPPLLPSRRHNQSEEPQPQAQSLLSISVAPGENSQGLASSRQTVQAVG
RNKNNAVGGDGTVSKPDSNPGAGQSEKPIDEDSLILTIKSAIFLRPDSLK
NTGYWTLNVLTAGLLGLLCRWYPTLLRQLRYATVDALDPRAELVLITSLD
DFESYTAILALDLTDLTQGWQPVGQVRRRVTRRHRGDQRAGQQGVEASPR
MFFWRHERFWFHPRESQGQSRGAGPWLRRAFDLSRSYREMHRISAERLEE
SLVDDVALDAAFARLLTYGENQLDVNIPPFPSLILQELLKPFFAFQLFSI
IIWILQEYYIYMYVVVALSVISIIQSAYAEYQNLKALERLAKADGIINKI
RLYASGRGMHASRRSDEDLLPSRSPCAAHAGGKLFACLTADPVATSSLQP
GDVVHISTNMILPCDVLLLAGSVVMSEAMLTGESAPVLKSALPLDAPDTG
FKPDSDRDRRYILFGGTKVLQAKCGNVPPVPSEDLAADGVRCLWDFGVPG
PAASDHHSHHHHRHAGSITFEEMPAMGLVLRTGFSTARGQLIRAILFPKP
SKFNFERQTFLFMRILLLVLGVGIAFQVAIYRRNRVDAFKTFLDSLNLVT
VAVPPALPLALSVGVSVALARLKSYGIFCSDSSRISAAGRVNCLCFDKTG
TLTTDGLTLKGVVCVQQQQQQQYQSGDGNADRSDIRSVLGTKVLGGDLVT
DVTKLHAVALEEGVRKAISRNNSSTCLSSKADENAVKGTGAAPPLSLSSA
AMALPTAATNLFNEAAEPANNHKLMLSYVMAACHSISILDQTDDATALVL
RLNSEIIADPSSLPERRQALERILEERGLLSTVEELVLDPDHDESILIKV
EVEEEQEDGHEEEGGVASGHRRGLGRGSSSGGGVSGSGAGSSGRPYHPVN
EEKEEEPLLDLPIAAYSDNVSDKTQHLVGDSLEILCFQESGWRYCVRPSE
PPNLSELLRTMGPGALKRLFRDGAFDDFNIWRHPRLASYVDTVLLPPKSL
KQTRHSSALAMVRRFDFDSDLRRMAAIVRTLPNLEPTGLSSAGNTRKRGG
SASRFRYDQAGQHFLLVKGAPESIRDICNPATLPHDLEAQLQRLTLSGYR
VLACGTRALELLSEAELLRGTREELEKNLTFVGLLVMENALKEETTGYLR
DYARAGLRQIMVTGDNPLTALAVSKMAGSAFLCAWRHPLLVDLGSGAGTR
DPLLAVVDVLDPTLQWDLQEYLQAYLGSALLTLNATKAAEIGKGMIDDRD
SGGSSRDSSSQGDDRPRNSKDRIPSTTPALALAGNGGRKPPPALAAVDLV
CTGRAFAALLAQHAPLREERDCDGEAWTPLEVVLLKCNVFARMSPHNKQE
LMRSLQELDYVVCMTGDGANDSGALKAADIGISIASAKNVLLSEPGTAQK
KGKAAPGDSSARVLDGTMAKGKADEASEDEERQDDDNPENAKIATEISTA
EAAVTAAPSIAAPFATGLHHIGAVCTVVTEGRGTLATSFSMFKYMFLYGI
IQFCGVLILYAYLLELSSMQYLYADLFVVLPFVTFMPSMEATPRLTRGTP
ETNLVSLSVMRSIFGHSALIIFFQLFQQWLLLRQDWYHPPDYNAPGFDRQ
VTISSSSKFLFSNFMYIFLAIAFCQTYGLFRVPLYKNLILSALVVVEVTV
SIFLVVLDLPIFDHIFQVQGAELVPAYRHKLVGWGLISGLSFILYERYLV
PHKSLDEDPVAAAPPRRIVTAKYGPFRRDGGRCGVGGIAEVQGEDAAAVL
MDEPVDMVEKEGWFWRAFNGEIKCFPKFWHRTPLFHRFNVKYD
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Synonyms
Publications