Naga_100015g62, gene2978 (gene) Nannochloropsis gaditana

Overview
NameNaga_100015g62
Unique Namegene2978
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:713925..715709 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100015g62
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:713925..715709 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02100NO09G02100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3100rna3100-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3100rna3100Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3100

>rna3100-protein ID=rna3100-protein|Name=rna3100|organism=Nannochloropsis gaditana|type=polypeptide|length=539bp
MDASHAPSFSSSSPETTQVVIHRDVYPCCILLYLTLPACYHAPLPSTKGI
IAGGRRLEGVQGDDKTSTNTARNLSATTKMIVITEKELTLLAGAGGLALY
AGKQGPKCPFHRMLFAASNLVLLGGGVYVLWRSWSQSPPAFWCSLQTVRK
KSRERLRGGKKARGEDAKHQDARVAAVLDLVRPNIWELEPYRCARDDYSE
GILLDANENSFGSALPPEDRVLELERYPDPYQQPLKEKIAVFRNVRPEQI
FVGVGSDEAIDLIMRVFCEPGRDQILVTPPTYGMYKVSAKTNDVGIVAVP
LTPEFAVRVPEVLQAVAVSPRVKVIFLCSPGNPTAKLVPLEVVEQVLQGA
SGCMVVVDEAYVDFANANAVSACQLVEKYPNCLVLQTLSKAFGLAGIRCG
MAIGHPAVIQVLNNVKAPYNVSQLTSHMAHKVFTAENLAVLQQNVSDILK
EKTRVVEALQGLPAVKKIHPSDTNFILFEVPRAQEIYRDMAEAGVVARFR
GHELHCKDCIRLTIGQAHENDTFLDLFKKTTEKYLGKYT
back to top
Synonyms
Publications