Naga_100125g10, gene2892 (gene) Nannochloropsis gaditana

Overview
NameNaga_100125g10
Unique Namegene2892
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:472832..480709 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100125g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:472832..480709 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0006950response to stress
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0016740transferase activity
GO:0004518nuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01170NO09G01170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3013rna3013-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3013rna3013Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3013

>rna3013-protein ID=rna3013-protein|Name=rna3013|organism=Nannochloropsis gaditana|type=polypeptide|length=2503bp
MSKKGDGGNIEANNSRGSTNGASSSTSRRPGRNYANASQAARLQKSQKAS
ASRYRAREAGDEFDIRFGYSRFEEGSPRLGWLLDMNASTVPDEEGRERSG
MDLYFLQQDGDTFKVTTFYEPYFYIGLRDDRYIAEVVQLLQRKFDQVGMT
ILACDKEDLDLPNHLSGKLHRFLRLSFFNVSELMEVRSVLLPLVERNKQR
MAVGLAGDAREGGMEGLGPGAGARPPDDFFETLVDIREYDVPYVVRVAID
LDLRVGAWYTVTARGEHVALKWEKDIIEKAEPRVLAFDIECTKAPLKFPD
ANVDQIFMISYMVDGQGYLLINREVVGEDIQDFEYTPKPAYAGPFTVVNV
PDEEAVLREFIRHVQELRPQIFVTYNGDYFDWPFMETRMEAYGIEMSAEI
GVAESQGEYRGRAAVHLDAFHWVKRDSYLPQGAQGLKAVTKYKLGYDPVE
VDPEDMVRFAHERATEMASYSVSDAVATYYLYTTYVHNFIFSLSTIIPMK
AEDVLRKGSGTLCETLLMVEAFRGNIVCPNKQVEAPMRFHKGHLLESETY
VGGHVECLETGVYRSDIDYKFRLVPSALQALIDNVDRDLRFAVEVEGHAR
VENVVNYAEVKAEIIERLAELRDTPLRDEPPLIYHLDVGAMYPNIILTNR
LQPCSIVDQSDCAACDFNQEKNQCKRPMKWVWRGDHLPATRSDFEQVQVQ
LAYERTSTGEAYHALDRAEQTRKLRERLKLYSHKVYKKTKVTVQEEREDT
VCMRENPFYVNTVRAFRDRRYEYKVLTKKWKSVKLKAEASDDALGRKAAE
DKETVFDSLQLAHKCILNSFYGYVMRKGARWRSMEMAGIVTDTGARLITQ
ARELMEQIGRPLELDTDGIWCILPVSFPENFTLLTAAGKKIPLSYPCVML
NADVHERYTNHQYQDLVDPATHRYATHSECSIFFEVDGPYRCMVLPSSTE
EGKLLKKRYAVFNKDGSLAELKGFELKRRGELELIKAFQGQVFECFLKGS
TLEECYNAVGDIANFWLDVLDSRGEELDDEEVVGLISENKTISKTLDQYG
DQKGASLTTASRLADFLGPDMVKDKGLNCRLVIANRPHGAPVTERAIPTA
IFSTAPGVRKHFLRKWLKDSAMSDFDIRSLIDWDYYKERLGKSIQKIITI
PAAMQKVPNPVPRVLHPDWLDKKIRELTDGYRQLKISNLFAAEKNAKGGV
GTPGKHALMDIEDTMGGLSRGKGSPLKPYTAVVRRAGRKLDEEGHDENDS
TEANGKIGQDAAVEDVPRPIQEAKAVGESAGMPASRRRCPAIGEDFQGWL
AFRKAQWREGRMERRLEARGRRGAVGNRRPRHGEGVEPGTQGVTKRQNVA
SFLKGAALAVTQGCWQVIEIRESELPGEFVVWAMTGQKSMQRLHLKVHRT
MYITSNMDDEVGFQKIKGRRVTRFLPHGYRSPYTYEVTMDERRFLSNENN
LARWLSTAGVTGVYELQTPLWFRAIAKVGCLAQVSSRYQGGAGGGKSGSR
AFRLEDLESLSTASMPYLHPSTAVFRNLYVYISQSARRALVALFVLGGDN
RDLELESADAANSVHSMRATAQVWLANPFSTAEARPPLKRFFARYAPPGV
ACTFSSTYVASLKSALAQLNAALTGYIQERHGPTVVLSQSVLDLSILRRS
VPALNDLPVVSMPSNADDNRYPALSWQSYSTQRMIQRFLCMPGWLQDRLQ
AARYSHLPLGNLGLDPQRTMADVLLGRLLHGNRHVLWASEGTRPDLGGAE
DDQNDAWADEASNPVIRVPGAYRKVCIELEIEGLAVLSMLSAVELEEMDG
AQGLATSDVAQGNGGVAGPGGESAGAGGGDDRACASAFRLLRVLVETWMG
EVERVGSLQADALATNFWRWMCDADSLFYDPALRRLCLMLINKYFHRLVA
EMRRLGAQVIFANAQRIMIATNKEDMASAHEYASFVLRTVLSRRIFSRLQ
ITPVRYWWQLFFFDEHNFGGLGYKDPEAAAAHRAALKAAAAAEAQEAAER
TAAIAAAEEAVALAAVEEAKVRRKMRREGRGGGGEGRRGDRDGVEEDVEE
EEEEDDDDESEGEEWDGGGMLGKKRASVGGGADEQSKEESAPLSQSDARR
RRIVEEEEEEEEEGEEVVGSQSSTEGTGSALVQGRAKSRLEEVGEEMGDD
GAGSLRGEEGAEADVDEEDYDLQSHWDMLNYLPAALRHPFDYVVATMLAD
HLREERDRKEHRKERLAALGNRLLGTSQGQEAEAEEEVEMLQKEEENHER
SMVRFLQKMVEGRLTRTLLRTVQDIDNEFRGPECFPATVGVHRQSTTPAL
EFVKVVCGLLKLDSAVEEQVVVLRRQLLAQLGAKEFSEQGLSADYCRSFV
VPDLICAFCSHCRDLDLCRDEQLLSEDPDRWWRCPHCANRYDVDRVEQLL
ITAVERQVTRYALQDLRCVNCRRVSTLSMSDVCKCSGRLVGDEKPSEFQD
LMATLRRIALQYSLAGLKEAVDFALRIAPDTEIKHDLDDLQHQFQQQQPF
VSN
back to top
Synonyms
Publications