Naga_100282g3, gene2697 (gene) Nannochloropsis gaditana

Overview
NameNaga_100282g3
Unique Namegene2697
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1316569..1322606 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100282g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1316569..1322606 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G05340NO05G05340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2817rna2817-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2817rna2817Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2817

>rna2817-protein ID=rna2817-protein|Name=rna2817|organism=Nannochloropsis gaditana|type=polypeptide|length=946bp
MANDRGVVSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKP
VKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTF
ERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIW
SLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVH
LAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGL
ARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDA
YSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMER
RPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPK
KAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCT
WAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGE
ERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKV
ATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFV
ARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAI
YDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAK
NMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHG
NEETFRDMLRVKRTIQTAFSQVNYMADDAMAMVQAKEGGGEEKDEATADA
ETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEELEAVERQAKR
LQAVTAAAVAALERNEEEIDIEDMEEEGEEGDRIQEGGEEKEIHIEGDTE
IQVKAKPVPAAVFARAGLEEDAKDGEVGNGGSMGALERLKKAGGQR
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Synonyms
Publications