Naga_100008g107, gene2613 (gene) Nannochloropsis gaditana

Overview
NameNaga_100008g107
Unique Namegene2613
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1066873..1071414 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100008g107
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1066873..1071414 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G04500NO05G04500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2732rna2732-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2732rna2732Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2732

>rna2732-protein ID=rna2732-protein|Name=rna2732|organism=Nannochloropsis gaditana|type=polypeptide|length=1094bp
MASLEAIMPTTAKTPFGADKEELAKYRAGQALNHKAVAPILKDIQGRRTG
LVIDNRISKDSEGFEDIDAFWEMASQGDESSLRGARRSDRRATNLSVGRY
SRDSQGLALGLDSLPGEDGGRRSSASSLGAPLSEDVVSAKKNLRSSSLPA
EAVAAARSRRRSSTLSYESSSPMAGSTPLSDGPGLTVSPEGMAEDDHTPA
GLSAAARLSNIKAPSRRLDFLLSQKESLGGGAVVLGQREGKEGGGESEGE
SEAPTEEEFEGTEDAAAVAAVAGRRRSSASNGDGGGFVDDWGAGGADEYL
DEGVGEEPVEEPVEEEVEEAREEKAELVGTKEKKKGKTVAREKKAAERKK
KGGKSQASRPRAPESERDTEVSSYEDEGEDKEERRKTQERFRRLRLSEYN
REMGGKSLLQEGSGEGGGEGPVGERRSTRRKVQPLQFWKNERVLYAVEST
EGVDERRRREEGGKEGGREEAVDCMAMKEVLVANQTPVAPRRRKRKGGRG
GGREAKRGKGEEGKEVQREAWGEMDPERVYKKHPNYTYVKDGQGKGRVWD
ERKALRTTRRVVMRVDQVVMRPLENEEEDGVALEAGHAFRVLQVARSRED
RAAHEPSLAGYPGWVAGHMTLMPRKGKDPENVGPCSQVFHVLACEKNALE
LAVGELGEDAFKFNEEAATRFLLGPGDSFHLPPMNVYKLYNHSKRGPAKV
FWTIVKPWSEEEEEGGAGGAEGGKKGSTGGKDTPVAAKRGRKSSVVTGAG
KGGRKRPSMPVSAVKENDARSQASESEEEELEVSSGEESESEQGEEASES
DSSGSDVSDRRDLPSQVLTRTFITTTMCTAKIKVEVNFGDFYEIGAKGPD
IQKKLAAVLIGFIIIKCLKKVNRVRRKKSLIACMSLRNASLAVLRQKKSL
LSALQPAQYTQPCLLVGGGSVGQHLRHSLDHFRKLFEGIAVPKAGTVSSS
SSHSHGSIQYDVRDRGTEIEKDLDAARREVERLIADVKALSSERLKDPVQ
ATFVLSAEGDAAALCSTVGRELGFCTHHAIHHHALIKAIASDLGIQANLP
HDFGLAPSTAHHQKVHSAPKLAVRHEHRIYMREGLLAPRSITHS
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Synonyms
Publications