Naga_100008g60, gene2573 (gene) Nannochloropsis gaditana

Overview
NameNaga_100008g60
Unique Namegene2573
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:969283..972993 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100008g60
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:969283..972993 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G04140NO05G04140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2690rna2690-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2690rna2690Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2690

>rna2690-protein ID=rna2690-protein|Name=rna2690|organism=Nannochloropsis gaditana|type=polypeptide|length=1038bp
MTIIPTLILLVLLANEGASVRRLDSTFSERDARRSLEAERLEAEGFRRLK
ERGLAADATSPDEHLVKQLPGLADDAFPTRQWAGLLTVDEAIEGKYFYWF
VEAASDAANKPLLIWLNGGPGCSSMDGFFLEHGPFKVLDDMSLSVHPYSW
HHVANVVYVDQPVGTGFSFTGRRQYCDEDDCINKHMYSFLQAFAKLHKDL
VLPTGTEIKTKPIFFSGESQAGHYIPSMVDYIMQQNPKAASPEVVLDVQG
MAIGNGWFDPPNQYDVSDYAHGAGLISEGQYHTLQKKRQECNSLLAQGKY
YTPICFALLDLVVGSTGTDQTGFVSFYDYRKYDHPGDRVFPPGHRTAEQY
MNLPQVKEALHAGESPLRFQECTDPPYDALKHQDGLGVTEQVGRILEGGV
RALFFNGAFDVICNHMGNEAALQALKWSGQDAFHEARRAVWIPEGGGAAG
EGKPGGFAKSSGALTYLVVAGAGHMVPLDVPVAALDMMTRFVNLKSFDDK
LQGIEMTVVPEDTVAASSATALNGAGETPTAPQTPTLRKVTASETESGVV
AFDVEGVDGQEQAVQSEELWYTVLVNPGGSILVPRQSDAGEEDADVAQPG
PLLLTDLKEGVDYTFQVLANNVVGASKPSEPARLVLGCGGPSGAGGPNVT
TCEHGLCGLDAVMDEKRCFCYAGWGGSGCQVAGPVVSDSTAAKGGNKKQD
SGAKEGVGNGRVTFVVDQSCTDAQVSEECALRFTVPLHLNAHASSEDKEG
GGKSSEWSVLDGPEETNAFEGMLRRDLAQILDVRKEQVELRALQPLKATA
HQLPGASGGSRLLEDTATATPPAETPSEEKGGPTPGVEGPMALTFDVLHP
LDPSGTVKRFTSVWAMPQGPLSFGLVTSNFDVNRNAEVLLLAQGTPLPGL
LDSSSSPDVILEKKTKRTATLSFAVILFLGAVVLMIVRYSRRKLGFGPGG
TGSGAQQRRRQEMQGGGGRRRMDSPEDQDLDHDIVLDGSGDDGTVVEIME
MRMPTGSQGSRGGSGLGGSGSILSRIVPDKDGADERLV
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Synonyms
Publications