Snu114, gene2464 (gene) Nannochloropsis gaditana

Overview
NameSnu114
Unique Namegene2464
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:706402..709741 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100036g5
Gene biotypeprotein_coding
GeneSnu114
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:706402..709741 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03000NO05G03000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2577rna2577-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2577rna2577Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2577

>rna2577-protein ID=rna2577-protein|Name=rna2577|organism=Nannochloropsis gaditana|type=polypeptide|length=1000bp
MEDELYDEFGNYIGGGLDDSSEEEEEEEEEEEEEDGMNGFGDEDEGADGM
ERDDVLATMEANGASSSIVLHEDKKYYPEMEEVYPGVNTVVLDEDAQGLD
EPIIQPIRPKKFSTLLSEKELPQTRYTPEFLTTLMETPTLLRNVCVMGAL
HHGKTLLMDLLIQQTQEAAWDPSKEVRYTDTRKDEQERALSIKSTPVSLV
LEDTRGKSFLLNVLDTPGMVNFSDEVSAALRACDGALLVVDAVEGVMMQT
ERLIKQALREQLALVLVINKVDRLILELKLPPADAYYKLKHTIEEVNACI
ERHTPNALVRRPQRLSPALGNVAFASAVHGWCFSLGSFASLYASYHKLGD
QFETTEFAKRLWGNAYLDEASRTFRKQPPHPEADRSFVQFILDPLYKIYS
HTLGEDAAELTEVIRELGVRVRREELHLDPKPLLKLVLSKFLGPPTGLVD
MLARHVPSPVTAAAAKVEAVYTGAQDSEAALAMKRCDPRGPLMLHVVKLY
SAPDGESFQSFGRVYSGTITAGQQVRVLGEAYTLEDEEDMAVREVKSLSI
GQGRYRLEVSTARPGNWVLLEGVDGPISKTATLIEAKGNDEAAIFKPLKF
DVAPVLKLAVEPLNPAELPKMVEALRKIRKSYPAAQTKVEESGEHVILGT
GELYLDCIMHDLRHLHASLEVKVADPVVSFCETVRETSSLRCFAETPNKQ
NQLHMIAEPLEAGIARDIEEGAVSTDWDRRAVGDFFHAKYGWDLLTARNI
WAFGPDAQGANVLINDTMPSEVDQRLLDNVKDSIVQGFQWGCREGPLCDE
PIRNVKFKILDATIAPEPVHRGGGQVIPTARRVAYSAFLLATPQLMEPYF
KVEVQCPADCVDAIHLVLQRRRGHVKEDRPKPGTPFYTVEAFLPAIDSFG
FETDLRAYTQGQAFCSQVFDHWKEVPGDPLDREVVLHPLEPAPINSLARD
FMVKTRRRKGLSEDVMISKYFDAELLQSLANQQAEAAALEMGGAGFGGYY
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Synonyms
Publications