Naga_100026g62, gene243 (gene) Nannochloropsis gaditana

Overview
NameNaga_100026g62
Unique Namegene243
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:640985..645300 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100026g62
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:640985..645300 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02420NO02G02420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna254rna254-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna254rna254Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna254

>rna254-protein ID=rna254-protein|Name=rna254|organism=Nannochloropsis gaditana|type=polypeptide|length=1271bp
MASPNIAPPLNLLNLTMQRPGYIHAAVSGNFSSPKAQEVVVIRGTSYLEL
LRSDAERFKITPVCTFNTFCNLRCLLTFRQVGTNKDYLVVGSDSGRITIL
EYVVEANEFRTVHCETFGKTGCRRIVPGQFLAADPLGRAIMISALEKQKL
VYVMNRDAGGRLTISSPLEAHRSHALVYATVGLDVGTENPIFAAIEKDYS
EADQDPTGEAAAETYKQLVYYELDLGLNHVIRKWAQPIASTACSLLAVPG
ERFNGPGGVLILSENWVAYTHQDHPELRTPIPRRAGQAASRGTLLTAAAM
HRQKDVLFYLLQSEFGDLYKVTLDLNQERTRVQNINMQVFDTIPPANGLC
ITKTGLLLCASEFANHILYQFQGIDNPEAVAADSLDEEALDDEDKLGDTA
EEAASVAPTFTPAKQLKNLAAVDRMESLAPVTGMHVADLAGEDAAQLYTL
CGRGGRSSLRILRHGLQVVEEASSDLPGRPNAVWTIKGRQDEAHDRFIVV
SFANATLVFSIGDQIEEVTDSGFLGTAPTLEVKLLADNAMLQVHTHGIRH
IRPGRPVNEWKTPGRKSIEQASANERQVAIALEGGDVVYFELDAAGMLME
VASKEVGLAVSCLDLGPVPQGRVGSNFLAVGGYDSTVRILSLEQASLLTQ
RSMLQLSATAESVCLAEMAKEGEGAGIGAGNAVSIPASSSSLFLNVGLSN
GIMQRLVLDPLEGTLSDSRQRFLGAKPVKLLRVDIEDRSAVLALSSRAWL
SYNHHGRFFQTPLSYQGLDYASGFASEYIPEGLVAVTGSSLRIITIQNFG
NVFNQTEVPLRYTPRQMVQVPGSSRLVLIESDHNEYNETERAFLASTGAV
ESDKATDKEEGEEPTKAADSVAAAAALAAAEGALPPPPPPEEGTEDEDGA
EGETFVRGPLPPVEGKWASCIRIVDGLTGETLELVELALNEAAISLTTVA
FHDRGGEVFICVGTATDLCFHPRKHSAAAIHVYRLFDNRLVLLHKTEVED
VPKSLAELKGFGRLLAGLGRSLRMYDLGKKKLLKKCENRNLPNLIVGLQT
MGDRIYVSDVLDSVHFVKYRRLENALVIFADDTSPRTITACCTVDYDTIA
GGDKVGNVFLLRLPEKVSDDVDNPTGNRVLWDTGRLNGAPNKLDVLAHFY
VGEVVTALQKVSLVPGGQEVILYATVAGTIGALVPFSSRRSKNTFFLLEM
EMRKEASLHFKRDHIAYRSYYTPVKEVIDGDLCELFRTLSAVKRRAVALE
VLDRTPGEVVKLLEDFKNTIL
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Synonyms
Publications