Naga_100004g164, gene2408 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g164
Unique Namegene2408
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:569616..573998 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g164
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:569616..573998 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02380NO05G02380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2520rna2520-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2520rna2520Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2520

>rna2520-protein ID=rna2520-protein|Name=rna2520|organism=Nannochloropsis gaditana|type=polypeptide|length=1006bp
MAVWKYAALSQEEGAQGAASLPETVPAGGSGSASYAEDDVALKRRMPFCI
GLTVLLAIIYVLSRTENMQCPPMDLSNIDLGDVRAQRLSLTPPHIIECAA
AGEGGSQKACHLPRKKRYASVGQKGITLWMTGLSGSGKSTIAKALEEELV
LKHGKHVYRLDGDNIRTGLNRDLGFSASDRAESVRRVGELACLMNDAGTI
TIVSLVSPYREDRDIARRRHEEQGLKFMEVFMDVPLDVVQDRDPKGLYKK
VAAGEIKGFTGVDAPYEPPLEPEILLPNYKMTIDECVAVFLQRLRAEGVL
EGGEVYPNGLPLPDGGQVVDLHVPPSQLSDKKAEAANLPRVLLTDIDLNW
LQTVGEGWAAPLKGFMREGALVQALHHNSLLVDPQNVTGHSGILEMPTDW
NGYTTRDRISMSIPIVLPITDFTKFGVERSGKSAVALSTKDGVIVAILRN
PEIYKNRKEEIIARTFGVIDPGHPYIKHINSGGDWLLGGEVELLGRIKYD
DGLDQYRLTAKELVEEFVRRGADAVFAFQTRNPTHAGHAYLMKTAREKLI
AKGFKNPILWLSPLGGWTKEDDVPLDVRVKQHVAVLNEGMLDPNTTVMAI
WPAPMIYAGPTEVIFHAKSRRNAGAGFFVVGRDPAGMKGSVEAATFKEDD
LYHPDHGRYVLQTSPGLGGMELVAFQQVKYDKRDHTMKTPDPKRPDDFIS
ISGSKMRLLARNGAVACPLPMPSDVVAANCVPPGFMVPTGWAIVVDYYQN
ADSKRWVSWSRPIVKPDSAVSTEVEGQYGTGDFALYLTQQGKKISPWHDL
PLKVAENIYTAIIEIPMYTTAKLEVQKQLAGNPIKQDVHDDGTVRFYKYG
SPPFNYGLLPQTWEDPSAVEGGHGGDNDPLDMIEVGSGPLPIGTTVKVKV
LGALRLIDSGESDTKIIVIREDEADTIYDMLSLENAKPGTATQLVQWLKY
YKTAEGKGVNSLVSEIPSSAAEAVQVIEACHARWQALKNGTAVDSDDFYL
GRRNRL
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Synonyms
Publications