Naga_100004g152, gene2398 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g152
Unique Namegene2398
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:542818..547666 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g152
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:542818..547666 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02280NO05G02280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2508rna2508-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2509rna2509-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2508rna2508Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2509rna2509Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2508

>rna2508-protein ID=rna2508-protein|Name=rna2508|organism=Nannochloropsis gaditana|type=polypeptide|length=1375bp
MKTTSQPMRRRTPEIQELLDGLMYLQTQASASSNKARDKAAMHAKVQLKA
WFRGLSVSRRVRLLQVVEPAFLHLLLLLHSKALALPPRQGRRPSMVKFYI
FAESVPALATRSISGRPSRSNACARSSMKHGVREAADCFRLREEPFMVRP
DESRRSAWGDPVRVGTRVRTWRAWETLAASLRLFRPSSTQMSQRDQQWQE
PVSRVAGFFSRDLVLDVDEFFQVLEDASDGGFLRGGLTKIEATGEIFGEA
AWFRCKGDYSIGELLANKIELLLCQGWYADRSKRPARKPSSESVAICSFS
GYSEERQALESFLFTDLSDPQARLRCILSAMAMVIRQVIRKEKEKMVVGD
GAFKMWCCQLKFMIETTQQLPYQQKKLQCLLTGDTKDQGLREAFLDDLFS
AQLGDAISEPQRYGHIQALLRAELMERRTSWKQRRLLDELEQEGIEKKIN
GSLQPFAGTTSTIASLTPVGTVKKKKKKRRDKCPDPAPVTVTLSGNVATG
EYRTVMQEEQKHTADLRDTNVQGKIKLIARKDGEDRHFSRALSSPPCLTS
IKMIEGPSIEMDSGSKTVMRESENSKPRNEHLPTGFSRCVQYDEKKRDEG
VMCFYKDEEREKNSLTVETQKMARKCEIKDEVLAEYEDVDGDGSSMTCDG
QQDESVTDTENIPPENSLCQGGAVTSASSNDTLLKDLCLKLEAEVATLRG
VLAAQREAISSGSGNLHTSYTHSLAFPSYGFDSAPLHTKHVPPYQHPFLQ
RSELHQLEIMSDDGRGGGADGTATAAWLGEGSQHHVALSAVSPFAANGGI
ENLYPGNGDKPVLSIAAATSTRNCIHGKRTGSSFEVSIPRNPSGPLHVWG
ERQPLINPIQQPQRNHVSQDHRQSRHALSASVSLGGDDVCTHSSLSTPGV
AHANSTYQAECEIPALHAGREWSRHSENGPCQSSAHVCFGFTLRQIPLDI
RSRLCDDIAAFVERVSVCTGSRLPQQTVAINRCRQVIQSLWPRAQVKAFG
SFVSGLALPSSDVDLIICLPNVRRDAPAQAPGVLEGRNAIKETWQQELAR
RLRATSWVNPASIKIISHTAIPVIKMTVESQPRPSPASPHPTSPVEGGTG
TVASGQHSEMAAASQRPHSCRNEADLSAEPEGVALNMGWTVEYGVHLDVS
IEGGQHNGLLANRVIAKLLGENFALRPLVLVLKQFMKERGLMESYSGGLS
SYGLVLMVARYLQEQSNAMDTGALLLGFLDFYSNHFDPRSMGISTNQRCY
FSRSSQQSHLHHQHHQHHQQNMPPLGSNRRVSLGGAGDVHLPYYYVHQQQ
QVRPAGGSFLENPYKFDPLYIEDPIRPSNNIGRNCFRIFQIQRAWNDAWR
DLDPGSSGGVPRLNRIVQSDVGSKS
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protein sequence of rna2509

>rna2509-protein ID=rna2509-protein|Name=rna2509|organism=Nannochloropsis gaditana|type=polypeptide|length=1374bp
MKTTSQPMRRRTPEIQELLDGLMYLQTQASASSNKARDKAAMHAKVQLKA
WFRGLSVSRRVRLLQVVEPAFLHLLLLLHSKALALPPRQGRRPSMVKFYI
FAESVPALATRSISGRPSRSNAARSSMKHGVREAADCFRLREEPFMVRPD
ESRRSAWGDPVRVGTRVRTWRAWETLAASLRLFRPSSTQMSQRDQQWQEP
VSRVAGFFSRDLVLDVDEFFQVLEDASDGGFLRGGLTKIEATGEIFGEAA
WFRCKGDYSIGELLANKIELLLCQGWYADRSKRPARKPSSESVAICSFSG
YSEERQALESFLFTDLSDPQARLRCILSAMAMVIRQVIRKEKEKMVVGDG
AFKMWCCQLKFMIETTQQLPYQQKKLQCLLTGDTKDQGLREAFLDDLFSA
QLGDAISEPQRYGHIQALLRAELMERRTSWKQRRLLDELEQEGIEKKING
SLQPFAGTTSTIASLTPVGTVKKKKKKRRDKCPDPAPVTVTLSGNVATGE
YRTVMQEEQKHTADLRDTNVQGKIKLIARKDGEDRHFSRALSSPPCLTSI
KMIEGPSIEMDSGSKTVMRESENSKPRNEHLPTGFSRCVQYDEKKRDEGV
MCFYKDEEREKNSLTVETQKMARKCEIKDEVLAEYEDVDGDGSSMTCDGQ
QDESVTDTENIPPENSLCQGGAVTSASSNDTLLKDLCLKLEAEVATLRGV
LAAQREAISSGSGNLHTSYTHSLAFPSYGFDSAPLHTKHVPPYQHPFLQR
SELHQLEIMSDDGRGGGADGTATAAWLGEGSQHHVALSAVSPFAANGGIE
NLYPGNGDKPVLSIAAATSTRNCIHGKRTGSSFEVSIPRNPSGPLHVWGE
RQPLINPIQQPQRNHVSQDHRQSRHALSASVSLGGDDVCTHSSLSTPGVA
HANSTYQAECEIPALHAGREWSRHSENGPCQSSAHVCFGFTLRQIPLDIR
SRLCDDIAAFVERVSVCTGSRLPQQTVAINRCRQVIQSLWPRAQVKAFGS
FVSGLALPSSDVDLIICLPNVRRDAPAQAPGVLEGRNAIKETWQQELARR
LRATSWVNPASIKIISHTAIPVIKMTVESQPRPSPASPHPTSPVEGGTGT
VASGQHSEMAAASQRPHSCRNEADLSAEPEGVALNMGWTVEYGVHLDVSI
EGGQHNGLLANRVIAKLLGENFALRPLVLVLKQFMKERGLMESYSGGLSS
YGLVLMVARYLQEQSNAMDTGALLLGFLDFYSNHFDPRSMGISTNQRCYF
SRSSQQSHLHHQHHQHHQQNMPPLGSNRRVSLGGAGDVHLPYYYVHQQQQ
VRPAGGSFLENPYKFDPLYIEDPIRPSNNIGRNCFRIFQIQRAWNDAWRD
LDPGSSGGVPRLNRIVQSDVGSKS
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Synonyms
Publications