Naga_100004g1, gene2266 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g1
Unique Namegene2266
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:219584..221224 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:219584..221224 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL119ngnoL119Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00740NO05G00740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2371rna2371-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2371rna2371Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2371

>rna2371-protein ID=rna2371-protein|Name=rna2371|organism=Nannochloropsis gaditana|type=polypeptide|length=420bp
MAHDNEPALPNAALAPEDSHTTDSGTYGNGSCGKIDIKRNGVHGREDKTM
CPQDHTGWTTLGLVNLGNTCFLNTVLQALASLPPFKEALEQALTFRPGSD
APVSRLVLRYLHSLQPTCIKNDAAATFGAPFPPHSEAQSPSDLLYLLRGC
CASFFRRNEQQDAEEFLQVPSSFSSSSPSSSSHSSSSSSSSSSSSSSSSS
SSSFAAAAASSSSSFAPSFSSSSIAASSTFTFRNPFAGWLASVVKCAVCG
HCRPIQNSSFLDVPLSLHPPATSPSSPSSPSPPFLSPVVSSLRPLNGLLT
GRSLPAPPFRLPSASHPPPSSSSSSSSSSSSSHILELLDSFAQEETVRGL
PCHSCRCRHVLRDLTAKIQRLETGIRHVEEAGGEQVEGTLTFLRKEMKEV
RAVKENLLRLDGSRPTAGAH
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Synonyms
Publications