Naga_100058g15, gene2091 (gene) Nannochloropsis gaditana

Overview
NameNaga_100058g15
Unique Namegene2091
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1104568..1116962 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100058g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1104568..1116962 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL105ngnoL105Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00610NO04G00610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2188rna2188-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2188rna2188Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2188

>rna2188-protein ID=rna2188-protein|Name=rna2188|organism=Nannochloropsis gaditana|type=polypeptide|length=3056bp
MGSPTLAYPEPVVAAEGGVVARQGRGERKRGGTEGQLIEPFEIRVGLAMT
GDGAKEEGAADMAVTTSLQPSIRGVFTPACLKSMLAIVTNLGLPEVEEDE
DEEGMRKGERDSIPLGEVALQKERVVSRGGVGGVSKLQSTAQSRSPTRSK
ASLSSIALPPLVRVTNVTKGKEGEGENRAAPESGSESEDAEDPLKKKMTV
QVHIPSVVLELQADPSTSIGSPGLGRSLDMESPTDRTGADRGLPRLFIVA
MEGFSLDYLARAFDTDLRVALGALSIENLASAKKGGARRFLAYSSASSSS
ASSLSHTAPSKDIPGSQGQAAAGTEEENEERALVHFHMTTFADREKAPAY
PGFDCVIALKFATLDLKCDADSIRLLNPFYAALMRFGEEVPSLPPALPPG
LLSPPSVRRTQSVTSNASTHLSKRAQDKASRAAALAAAAAAAAAQQQEGK
TMRVTACLKRVSLELLTRSRQPVVMAELGGLTSEVEMGKGEREDEGMVVK
VVLQTFEVTDTQPESRTNAIRKLICPKHGVAEEEEEEEEEETDEEDEPRD
KGRKEDGLRVQRAPLLVAEVREDKTLKGYGVDVTLEDFTLNVLVEALMAS
IDVTLESVNGLLDVLAAGQAPSSPSLPPSAPAHPTATTSDAPFGHLSQLG
SSWHGYGGKGPPMGAIGEGTQEEEEEGSMEGDADHTRLSASALQGMTQDG
DGDKKEAEPMGLRVMVRLVNPGLILIENARNYDSRAVSLRGTYQILYLVE
HEKPGETGGGGSTVTIHVDAQGLEAYVDVVGAGGMGGKKGGKAPVQILTP
FAVGVHIKNQSEQEKLLVSETVLNVDRVLMRVAYHDVRLVQGILGGLSEA
WARYSQATSQAAAAAASAMAAAPSNAALTDPSGREKETEEIVGPVWDAEA
GGEEYTPVVDLEQDQEKGSSPANTAVMRRAQAQASVNLDAPGPEEEGATL
GLTPADEILMATKNTALSRTNLDVAGLEVMFINDYDGRDQPLLEINVEKV
HLDLEQCADAYKGQGCVWLQARFFNPAVLFWEPVLEPWEVRLDISTEANG
IVLEIRTPRVLYLDVTEAFIQTVSRTYSLFLSASVSSSAPPSISTLRSSS
DKESDGAEVNNALPLRTTSPLPSSPTMGTSPTNIGAAQYSFTNKTGLALK
VHSSSSPSPRSPRHVTDDDPTQDGKRVSPDATVALDVKEEGFGGGLSHGL
SDVKAGDSFSPISKSGSRGPEVTVTFMDNLGEERRPLENLNTDVPGVYVY
PLKPVAEIVKAYPRPVVVETWENERSDRLTCTWRTPFCPTDRPRWSDEQG
KRERKREEIVLPGPEWEWQDDWHVDMGLGEIGREIDEEGWTYGVEFPGFT
LNRIKRTYREMDGVRRRRWIRTRVPLPPAIDDPTRPLSVVWRVALLPDGR
TELSLETAVQLVNETDVAFEVLAIVDPARPPYPVDPIPAQGSVCMPLLLA
YASKVCIRPLVPKIGERQDTSDRPWSSPFLVDRGAGSVEEVVFCPPDSSA
SQSTPTCVVVDAAITDAGVKSIYLRPAFVFENLLPCHAWVSISPHENCDH
TRLLAPGDTAGVLSVTPQVTQTVKIRLAPYGGRPGEKGGGSIVTCGGYEW
SQELELGGPPNKFQNLKPFVLANHLRGEEIGITGWVVRVPRSQVRLHMSM
YVRCWIVDRTGLNLGFCEDPSKLGPSHAKMGRARSRASLPPSFGGHPSQG
AKGGAKSGGVTSFVPPVARIVDLAVENGSRDGKRQAECGYEVREVDNGNE
IYTDRPCLFTNLPPRLRRKTALLTPNDDRGRRQGGSDGRVVSFKVSQAAE
VYLLYDVSGRCIEGKTLPAWVKEGGWKKAEDFPLIVINTQRHEEGVIKFQ
AYRKHVDKLEEVVLGANAAGRKGGEEAWKGRQSRNNNYTVLVVQDPAGAG
GGFGGNRAFAESASTVLVPSAAEMQLLQAREEEGEESELGMYLYDPRKVK
KVSVCVDEDLGTWSKPLDVEGLVDRGVFDVPGKETSYDLSLTISVCPGVF
GLTKLVTVTPRFMLVNCLDEEVMVRQAGVEDRPPVLLPARGRSPFYWASK
QTQRQREMQIMIPGTTGWSYGGVCLERVGGTAVLLPQENDPRRQTPTVMH
VEVKLGEGEEECAVVVALWKPRPVDPPLYAVHNYTPYEVHFVQLDVRTSK
PRWVLPPGQTTMYGWEYPCLRHVLFLRLFNPRLPEKKFCCEMYLDKVLDG
DVIDMGKGNGRIYLKILAQDGTKVLKIVGSKSMLRPPRVASQRELTLRLS
LPGLGLSLVGADEEEGRREIAFFFVNGLSVEYLQGTREKEVEVKIKSVQL
DNHVRHAMFPVILCPRTASKEGESFIHFSLLAEVDTRSNVVSVPGSEPSS
TTTYHTIRYLAFRVLAMDLQLDLRSLLRYLHFAQQLVFLDFDRANAELHP
SRFVASLRSFYNFAEPLAWVDTSHTWRSVTNARVYSERIDLHPLSVALSF
VQTVADDKRIGFGGNVMEVVKNLASISRAPLQMKSFQVEHVMETPPFFLQ
IVLAHYKRQALAQILTIAGSLSTLGSPLDLVTSVGTGVKDFFYEPINGLV
HSPQEFAKGLKRGTTSLLKGVVSGALNSVAGVGDSLNRNVAMLAADREYT
VAREQRRQAATAGGTGLLDGLKDGGDSFVRGFADGISGVFLSPVKEARTG
GIGGFLKGVGKGVVGLAVKPLVGVSDAVVSVIQGASQAAQDLEVHVPVRP
RRALPRWSVAGQKVLTDYSLSAALVQERLEPGDAYVCHVSLEKEGKDVIF
TDKHLSLFNPSRGGVFWKRPWRDIAWCEVTEETREGGKEGRKNRGIWLHL
YRNDNESKGTLLQIDGEEDVWKVYAQLWRHRDRMGNGSMMKSVGTLQQEG
LEQEKEGTGEMVGDGRSPQFVGGGLVDGYVFGSKNDQDLRCRKLRSWDIV
ARARDRMIKSWTTWPELDDAVWKVINDWTKNHWGPWNFRKCMAVLVVNKG
TSGVQLQNMQFRDGSEVHVIESRGFEATSRVLSPEGAVLIFAWSHIPSLV
KNANIAVRMETTAFKGEFTDKVGNLEARPGSDVSFVEKTRKSAYVKYVVV
VRDRRS
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Synonyms
Publications