Naga_100100g21, gene209 (gene) Nannochloropsis gaditana

Overview
NameNaga_100100g21
Unique Namegene209
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:551448..553858 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100100g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:551448..553858 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL005ngnoL005Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02040NO02G02040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna219rna219-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna220rna220-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna219rna219Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna220rna220Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna219

>rna219-protein ID=rna219-protein|Name=rna219|organism=Nannochloropsis gaditana|type=polypeptide|length=689bp
MSPEDEPVGEQFSCRVVDDTLAWLSRAVREDEKGYLVGHACPGRRLPDVL
GALARRKNSETWMDDAKELQCHLPAGLQIVGLYGPSAIEDTSLPKKLQLP
SPGILAGIENSSLAFRDLQGSIVGVQATDGLSLLMADYVILRLPWSLPTH
WDGKFSEECLHLYFEAVPDASKGGGRVLPVPLGHSFCSKAPALVDVFSHA
AVGGATAADAMARRDGPDAKQRNARSTSSGKKCRKAKGAGKGGGKSQGLA
GGVEAVEAPVTLDDMVRYTPIGPVLDVILLHSLSSDSPKQSYGARMAKNG
CFRHPTAMMVDSGTEGKFCGMIKGDLLVYVARKALFASVKESIFAGMRRG
WHTARRSLLAAKGQCPCAPCWEVRHFYALDPRHGLSNACSPLAFPLSMTT
ALSLVGADGICFPGQEDDRSDLLAARKAVHERLKLPLNRPAFRTTCALRL
APSALSVGDEGATGEHQGPRVLQDVHTGLSRSSVADGAQHLVDGSYLFYH
YLVDHVDDRGWGCAYRSLQTLVSFFRLAHYTTVPVPSHREIQQVLVDIGD
KADDFVGSHEWIGSMEVGYYLDQALGLEWRSVSAPSGLGLAERASELAAH
FDSEGTPVMMGGGSLAFTLLGVDLNEATGEVAFLILDPHYTGPEDLEVVQ
HKEMVLAGRKARACEWRLPASFTQNCFFNLCLPQRPKLY
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protein sequence of rna220

>rna220-protein ID=rna220-protein|Name=rna220|organism=Nannochloropsis gaditana|type=polypeptide|length=605bp
MVPPLLRIRASLKNCNFLPLAFLLELKIAPSLSETCSIVGVQATDGLSLL
MADYVILRLPWSLPTHWDGKFSEECLHLYFEAVPDASKGGGRVLPVPLGH
SFCSKAPALVDVFSHAAVGGATAADAMARRDGPDAKQRNARSTSSGKKCR
KAKGAGKGGGKSQGLAGGVEAVEAPVTLDDMVRYTPIGPVLDVILLHSLS
SDSPKQSYGARMAKNGCFRHPTAMMVDSGTEGKFCGMIKGDLLVYVARKA
LFASVKESIFAGMRRGWHTARRSLLAAKGQCPCAPCWEVRHFYALDPRHG
LSNACSPLAFPLSMTTALSLVGADGICFPGQEDDRSDLLAARKAVHERLK
LPLNRPAFRTTCALRLAPSALSVGDEGATGEHQGPRVLQDVHTGLSRSSV
ADGAQHLVDGSYLFYHYLVDHVDDRGWGCAYRSLQTLVSFFRLAHYTTVP
VPSHREIQQVLVDIGDKADDFVGSHEWIGSMEVGYYLDQALGLEWRSVSA
PSGLGLAERASELAAHFDSEGTPVMMGGGSLAFTLLGVDLNEATGEVAFL
ILDPHYTGPEDLEVVQHKEMVLAGRKARACEWRLPASFTQNCFFNLCLPQ
RPKLY
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Synonyms
Publications