Naga_100131g13, gene2065 (gene) Nannochloropsis gaditana

Overview
NameNaga_100131g13
Unique Namegene2065
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1036743..1041577 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100131g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1036743..1041577 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL105ngnoL105Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01130NO04G01130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2162rna2162-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2162rna2162Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2162

>rna2162-protein ID=rna2162-protein|Name=rna2162|organism=Nannochloropsis gaditana|type=polypeptide|length=1434bp
MRRSLSETSIAVLFRLERLQVEVDSIAQQVTEIENAIEARRANVAPASVL
EGLDALTCNLKGIEAQTHAHSHDHIESGHEEAGLLARRIQSKGRAVSERI
ARMKKELPLAGMEVADGVSAPVEDEEGSMLELPDVVPCNGHMDDQTALPP
PFASVGGLDPGSVHRSKSCGLPARPGEKGTDMDRETGVEGATNIHADEAR
NGQDHLEDERSAWHSETELYSWGRTDLGSSFQCLGPFGSEGGGGLFQMEV
EEGKREEAGTAAGHGPNMLASTRQYSRSLSLPTAPLFAPVQSWYSRKNVV
NLCSTLYHTVAVTLTGEVYGAGVNEDGQVSPDRQEPQLWTPVLVEPLLSQ
RVTMVSCGDNHTACLTASGAVVSFGNNEVGQLGHSADAASSQRVGPRTVV
GLGSRMVKQVACGYLFTLLLTSQGEVFSCGVGECGGHADGANRFQAERVK
ALRYVPVSGLATGASHALAITVTGRLWAWGQNRHGQAGAGAGVEVVQEPQ
QVLETAGVRSAACGAFHSVILGEDGRVWACGKNHRGQLGLPSTEAVGSSE
GGDRIEGDGDRMEEGKGDEQDGDIEGGAPAASCYHVPTLVRQLEPLKVCM
VACGDAHTLVLTEAGEVWSLGSNSHGQLGTGMPSRASSMASAWQWRAQRV
PGLDKARVFMVAAGGEQSFAVGLGTGVATPSRRSELPVLSRDVDARELVR
KFSVIKPAASCVGVGYLLSLIHGAARASDMDTLERTLIDVFSSPSLLNGS
FLTLPTSSSRADKEELDGNGCIFPDSHVGNKIIDDIIRAPVGGAERAAGE
KSNARSSSCGTLSASASGLAVQGLEAVYVRAMKLNSPPLLSRLVQAMSGA
LDNLVSDAKNLADPDSLRCLLAYWQCPLNSNTSLSKDTFLKLCETVVSLP
LSGRLLLLRFVRADYPPHLFATRLLRPLHTHIEYHLRINFGKGRAVPILV
VTMSYLFMASEGGSWETTSTESGPWKTEDKQCGSLISPDQFANTAVSALP
DESLLHDLRTWKAVKEEKNMNRNVFTFCRYPFLLSAEAKRRLLYGEAVLE
QQQAAQKDMMRQMFQGGPVMPYLVLRVDRNHLLNSTLAQVGQCDSMTLKK
QLKVSFLDEEGVDEGGVKKEFFQLLTAQLFDFSYGMFKMTESKRDWWFNS
SGTSFGDPQEYQLVGILVGLALYNSVLLDLHFPLVVYKKLLGRPVGLSDL
GEIEPELMEGLLKLLDYEEDAKNTGEEGAMAKVEDVFCLNFEVDWVEFDE
VKRHELKPGGKDIEVTAANRHEYVDLYVQWVLAESIAKPFEAFKAGYDHV
MGGSSISLLRPEELMLLVCGTPHLNLHELEAVAKYEGGYEAEHPVIKAFW
SVVHEMDLASQRNFLMFVTGSAKAPIGGLGRLALLIQRAGPDSDHLPTAH
TCFNTLLLPEYGSKEKLKERLMKAISECRGFGLQ
back to top
Synonyms
Publications