Naga_100009g10, gene2052 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g10
Unique Namegene2052
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:998179..1000934 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:998179..1000934 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL105ngnoL105Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01300NO04G01300Nannochloropsis oceanica (N. oceanica IMET1)gene
NO04G00360NO04G00360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2149rna2149-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2149rna2149Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2149

>rna2149-protein ID=rna2149-protein|Name=rna2149|organism=Nannochloropsis gaditana|type=polypeptide|length=828bp
MSVPTPGSLGTAGIHSHFPPSRPPSEQIGIDVSLRERPAACVCDVNVQQH
LERGAIVHQVHMEHASLPESLASQQRSLHRQQQHQQHQQSQQEPQRRRQN
VSEMVPLTSNTPAYCSSSCSSSASSLSLDDLDQGPNCGASLEAEAHAPRS
PILPVRVDLVNVGYSTAQARPRQAPILRDVNACFQPGHLVAVMGPSGSGK
STLLRLVQGDHRYLRRLQGQVLANGTPVKAIHRAWRYLCSLVPQEDVLLG
SFTVRETMRFSTQLRLPHDRPAEEKEEVVRDVLEDLGIMECQDVLVKDIS
GGQRRRVSVGLELLVNPSVLLLDEPTSGLDSKTAEDICALLKALAKPGRV
VMCSIHQPSFKIFSSFSKLCFLVKGSLAYAGSVPNVMPYFAARGFRVPTY
DSPADYYMRVMQTEGPALIEAWADAAPLREPPSPPHVADAADTAPASAGS
DCIPSIRTAIPTPFAALATDGGEAGASVKDPPSLVAWDPTGSWLRSADAQ
DGRRAAHVSNWQQYRVLLRRFWEDSYKDKGKMMSGVAMEGSIGLLVGLVW
FQQDIHEKGSVFPIMGVFIMLTTIAIFDNCVSVGLKFPLTRALHFREFSN
GYYRLLPYYLATVTSSLVLASIYQLLQALLVFFLVGLHFTVGKFLVYLFV
LALAASMGAFLGFIVGTYTSDLKRTQEVLTPLLMPMIIFSGYMLPLPQIP
TYLRFMYYSSFYQYVFSSLAINHFSGLEFTDCSPLNSFCLSKGDQYLALV
GLAPSMLARNLVICVGFLLLLIGLGFMGLRRDLALGRERPFFFQKERQGP
SPRRWLYMHISVSFAHQSIVDDEDRFRE
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Synonyms
Publications