Naga_100009g20, gene2044 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g20
Unique Namegene2044
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:970706..978523 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:970706..978523 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01380NO04G01380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2141rna2141-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2141rna2141Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2141

>rna2141-protein ID=rna2141-protein|Name=rna2141|organism=Nannochloropsis gaditana|type=polypeptide|length=2322bp
MAWREGTATERTQQLVGQKIKVWWEDDEGGHFYPGQVVGYKEDEDVFQVV
YDDDAQPQASGKQSEVFDEKLEDPWLIADVPTRRITRERERMANGGAGAT
RSAVSGATKAPAPPPSSSASVASGGPPPLMPQGASTLNLIKNLPKTKITG
KATYADLIIEALKELHGRDGASLVAIRKWICKHNAEAASKQKASFNTLTK
KAILKLEAEDVVQRNTKSSFRFSPSYLFREREKQLEYQRMLVQQARDKAR
MERDQQAARMAKNAQNQARFMGGAAGYYGGPTAPGYHDFFSGEGGGRRRS
AIPSRYSAEVERTMEQNRAVRREWEMAQDRRNAYLSKFRPYVEAFLPDQR
NFFSKLEQMEEAKKAELARQREEDRRNRLEQERKEREASHVQQIEKERLQ
TIKAVAEPYQEEIKQAYAKVQAEKAAFNEAQAQAQAQAQAQALAEQQAER
AANWRLQQHPQPRQIGQNHQGPVQPPPQHAHKLNVTMLAGSDEIQGKGPG
AGLDTRPLPLDGGPELQEVMFQMGWVTRAELNAGLPLSINGKTLDRNSVM
PPLEMDASGNLNMDDRMLVNCVINSGPFVNHRVIWPGSKLSLAQVPKDSE
KDLMNLIEWRHLYWLEKPREEGAATKDQPMKREANVLALRLSDGRFVPHR
YSLMRYTMKYAEVKRIPLNNQVVIAYRCPHTGQPQRILRDYCWMSRYAEA
CRRCLKTRVEKDEKACQQLQDLIDRYASDTIVRPWLQNAASSNSHSHEDQ
KLREQNYHLHRQQQLQQQQQHQHLPTQQQQQQQQQQQQLLHQQQRQLLQQ
RQQQQLQLQQHLQQQQKQREHQRQQRQQQEQQQQQRQLQAQSHQTARNHL
AQQASQYQPQHQYSTLASHGGKALQQFEEQKQHRAHSGEDERGRVQPSQH
HRLLQQEPAQASNGVKTQTSELASMLSGQGRPPTTFHPAPTPAPASFHPF
PQSMTLQDLQQQHHRQQQQQLLQQQPQQQQQQQPQQSQQQPQQSQQQPQP
RHHHHHQQQQQQQQQQQQQQPPQPQQPQQQQQQQQQQPPPPPPPQQQQQQ
QQQQQQQQHQQFLHRQQQQQRQRQQQQQQQQQPQQQPQQQQQQQQQQQQQ
QRQQGQHTVYSHSVHPPPSQKAHTSSSVNAILSLPNGSGGNSCLVNHSNG
PFANSSTARPHSALPLSASRLQQQQQQQSHRPHQPQQGQQHSSLQYQAKG
IDGQSAPIALRIVSNQVPAANPVAPAVLQRKPPTMDPIFKERERWLKVAL
KKVQASSLADAQRAYGFLLEDGQSQPEALLAPVKEALEYARRTEAKLKEQ
LESEVSKTEVGVEEQKANVSQKIKEENSTTAIDRKEDGSIVKAHETQETA
KEATMADVVEVDSSKRADDITSDRKDKAVAEGESDPSSGYVSRNAVEAVA
SSTPLPVTLPRIAPMDGVPLVEASRTIQAKLHEHQVQGLSWLVHQYRNAV
PAILGDQMGLGKTLQSIAFLAYLKDNLHILGPHLVVVPLSVMSNWMSEIE
RFCPSMRCIRFHGPKQERARIKQEELTDVREFDVVVTTYEMLTSEISYFR
RKFFWRVLIVDEGHRLKNEKSQLSENLRKLPAFYRIILTGTPCQNNLREL
WALFHYLLPDVFTTASAEKFEEGFDAQRGVMDVARMKEARALLSLLMLRR
RKDQISMTLPPKTELAVVCGLSEYQRTWYKRVLTGVRNEVLTTGAGGAHE
MADPEWRKLLNILLQLRKVCNHPYLMSDSGYTVGEEMVEASGKLKVLDRM
LPKMKADGHRVLLFSQFTSMLDILEEYCQMRGHEYVRLDGSTNRVQRRLD
MRRFNAPGSNLFVFLISTRAGGVGINLASADTVVLYDSDWNPQVDLQAME
RAHRIGQIKPVRVYRLVVRASVEERMVSRAHKKLFLNEIVAEREEGEKGD
TTLDDLADDGAGDEDTYEGGGEENVDEDPVEEMGKVGSNTALARDEVARM
IRTGVTALFDTNKGDLTDDELDVLLGLKDGSSTGAGGKSEGGNGNGALEE
DAEDQEKAVAGFWQQAATGDLEEVDVRHLEGVNYEKAKPDFGGAYGKRGG
SQDLVELGVRKRKQRLVMVDGRGSGYGRSVPVLADEYLQSQKDAAAEATG
SGGSKEDTTSSGPRRLRRDWDHESGCFLCQKALIADPSKKGQNFKCGYCP
KVFHTSCLSNFTKKAVEGAGPANIMVCPHHNCHGCRRTTAAAGGLLFRCV
ECPRSYCEDCLEDENIESLGRWKPLEALGYFTKQAYFIRCPTYGKERQDV
FRVHVIIGRKEWNGPPCSEYVYFVDVLSKLVPSQPLSTNERATDSEISVR
DYMSSRQSGGRAKEITQLLYEL
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Synonyms
Publications