Naga_100009g104, gene1971 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g104
Unique Namegene1971
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:793218..796477 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g104
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:793218..796477 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02130NO04G02130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2060rna2060-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2061rna2061-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2060rna2060Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2061rna2061Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2060

>rna2060-protein ID=rna2060-protein|Name=rna2060|organism=Nannochloropsis gaditana|type=polypeptide|length=580bp
MRRKHPCCSRTPPRPPLTRLFPCQYASTSIPQGPPTHAHTAPPLQPTSAY
SRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELV
NGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAAS
KGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANK
INDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGT
EPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQK
ETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRV
SSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPH
PAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPISQAPDPHLPQIS
LLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQ
RQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNLRFPPLSTTEAA
SVVDRATAIPRPAPRPTTRQGSQSRALSPL
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protein sequence of rna2061

>rna2061-protein ID=rna2061-protein|Name=rna2061|organism=Nannochloropsis gaditana|type=polypeptide|length=591bp
MEADFGRSSLVNSSNMPGNVMSQPSNGGWPTSNHAYASTSIPQGPPTHAH
TAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGES
WIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSA
GYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLK
KNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLA
QVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCE
VFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLT
NKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFAS
APPLPSQPAPHPAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPIS
QAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNP
GSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNL
RFPPLSTTEAASVVDRATAIPRPAPRPTTRQGSQSRALSPL
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Synonyms
Publications