Naga_100002g23, gene1909 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g23
Unique Namegene1909
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:644730..655827 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g23
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:644730..655827 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
GO:0003774motor activity
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL111ngnoL111Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03010NO04G03010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1998rna1998-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1998rna1998Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1998

>rna1998-protein ID=rna1998-protein|Name=rna1998|organism=Nannochloropsis gaditana|type=polypeptide|length=3389bp
MRRFHMNHQFDWSHSSKGDPLWLSDTDEGYIEAILVSVQGDKIIVEDKGG
KRFTVDAGALSRGGPPPVLHGTGRNGGGRMKNAEGMRRLLPRASNVSAAS
PTTKTSVPPELHCHNMENMDDLHPLNEATILANVAHRFRTDQIYTRTGPI
LIAMNPFKWLPIYGPEVVRQYSGKPYGTLPPHCYQEAEDAYQQLQRTHVN
QSVVICGESGAGKTETTKLMLQYISIVARDDSEKEKARGHQGLEAGGTAA
MQEGVSPSPAKEPLTIGERLVQSNPLIEAFGNAKTLRNNNSSRFGKFTLL
NFKRTSNVRGSPVRHDLLAQPGNRQGGFPICGGQISNFLLEKSRVCRQQG
GERNYHIFYQLLAGASETLRKQLHLPAESDKDKANKFYYLAQSGCTQVEG
IEDADDFAMTRAAMDAVGITYEEQVALFQMVAGVLHLGNVDFESSPDGEE
SSVRREFGAGNNDGEVDNGESALDVAAEFLGLAPERLAEALTTRVRQLPG
GKTVRSPQTVAQSRDSRDALAKALYSRLFDRLVDRLNATFAEDGGSTSTA
TSITSSHRSNVLSSGSVSAPCFIGILDIFGFENMAVNSLEQLLINHSNER
LQLLFNLATFKREEEEYAREEIDWDRSDFPDNQPCVDLIEKKPLGLLPIL
DSECTRGAAASDGALVSTYNKSFRGHAHYGVCGPSTAWRKQVGSKTSTGS
HFTADTDFAVLHYAGGIIYSSNDFIDKNRDALFDHVNALLATSSYVPLVT
SLFKTNNDLPSFSASSSESPQFLAKIRASTGESGGDDDGTGGHTNLRASN
GTVSQRFNAQLNGLIQTLEGCDVRFVRCIKSNQLLAPQVLDKPSVLNQLV
CSGVMAALEVRRAGFPTRVPYCDFIRDFRVFTVGFPSSEKENEAITYDKL
LRLHRNETQIRAAVKPRMPSLKMDSTTPSTHDHPPGIYEVDDHDEANGQS
KCGELNAARSLTAMMMTHPAVLKAVTARQYRLGLTKLFLHADTLLVLQNV
KHKIILPKIIRLQRWWVRISESVLLHKLNRAAQLLHELESQVDVGGMHGT
ETVRRALDETATAVMYARRLNSLQPEVFRPAVERACKKARVAEELVERVI
AIKKRDSEQRAELLGMLDTGRARLSHAQRDLDDIELQGEARYQVIHRMDK
AAKALREQSTQLLQVANRNAIRSHGKNQDSEKGYEPAALHRLHLQATENA
DERMIDGTSLDRTGKIYKCLDEEDPEEVARRRVLAVEGVLTMVKDAEIAL
VHLQSQQERLYEAREKTKEIFVQIKKDFRHTLEAAESSGIVGDGMGVESR
AIQQNIATVRDNIAEVDCVLETSQDPTALQPAVEHAAFLVSELSSIVQNE
RLLKSSEERRRQGRQLWEEAHCKFKEFLSEIESSGIKGGNVPASAHAVTD
ASTDFESAIEQAASLLTSDDSYAYVHACQSLHGKLEKMNAILKAEILVKQ
RHDKVREIELARVKVAHEKVLNLLRSVEMHCTMAAEQQLCEGLCTSLSFS
EEVLANLQASPAVASLKDKVETAILQCAASERRYADVKQRHESQAREIAT
AHGELVAMQKRFKTLLSRYGIGGPAVADSSSDNQGTVGATNVLTTLCESA
MSLCRDALRNLENAVRLGACPSLSSALSAASESICEFESHVKTQSQRVEA
MCKARQEDLGRLLSTKGRFDSFLENVSLVEEKCQPGNAASPSFTLRSSML
SGSSFLGKPSLRKLVSEVKMGLQQVEEEIHVPITVTWFEDEGYHGKRQQE
RRSVNEAISRVEKAEGLIEHAQKRYAERQKEWQKCRLSLESGQAKLVCLE
NLVANGGMLVYLRAAQEILEACQASYDMTAKLVAKAHNTASALNANVDDF
DEQDVEESALIKVCQTVASFIEKVTNAEASLKAYQVREDAFTKEKLNLHE
KFHSNLCRFQENVAMIAAAGSTVQKLCQVPSDDAATAINRAARLLRRGVV
VTSDKNGGKVIKESEIDSARLYDPSDNDGMYTLQSMTEAIHEAVKRVDSL
ELEAQLLRRRVDRASAFKICESKKLASLQDALQVCAERAETYGLINESSK
VELPLSRAKLSIASIFSKLEQPLSVWMDNMTLLAKDVDAAIAEVVNVKEL
LNQDIELQARDKQEREQWLIGQRALQDRWECARDAAVNSGVMQLQEVQSM
LLAVESDLAGQEGIEDRPMRLHTLTQRVTDMEELVSRESQRLRIRELNVE
KALKAIPNLVDRLARLEKTLRSNFQTSSQRQFPEVSAAEATDTTAAGDES
LGRTHTYYNETKEERSDSKEDVLQSVVPLHVKMVVQEAKSAVWKVQHFAQ
ESLRSPQVPLPRVDWALDKLHEAEKMLAKEVDLKKAINKQRAGALQHYRS
LERKFAGIQDEVTTLCTKFSFFRVQLEAYSDGELFEWLGTQTNCVQSGTS
ASLLVDAAIPDTVACSSAQSMVRSIADARDALMYAQRCLSTEKKSTATHD
GITEDGSQLASKTVADSASMAAVLERAASKIDRANEILERQKDFCVRNEH
QRVVVLRSLEKEQDRIARLYAIIGTQGLDRTISPVANALQAAESALNAVS
QLIDAGQILVVGPAFDVAAARVQEAEDVVIWETERKRRLDRQHDAVKVEL
ERQTLRQKALRQLVQETKYLNQAIAVNDCMVDVGKALEHAALCVNDNPMS
SVPLATQHAELRFVNERLQAAEREIRRARIQHEEEERYARQQAEEARLRV
MRDAEQERIRVEIEKIKRSKLESELEKLTARLAFHRPTLDNIFSSMARAE
EAIKSARDTLSLQNEEAYGNDENGTCGECEKKNVGCGSMSRYSGDGRSSA
PDKGITEAAAAAEAALTLTANLEQLLHGSAIGKYSSLSLSPSGINTWGED
KLDLSRPKAEAMGEWENSTTSRSVSTEKLQIYMDKTTHTLEAVARSVEVL
NLGMTDLKMSVQEQGLQLNAHKDILKCASYSPGSITALPVEGKAFSTRAP
SSMGGPMVSRLPKEGSWEALSLLRHASTPPGIYGNGGPEEKGDILYSGSD
EADCDNGGRLEDDIGRSVDASKQAALCLREEKGVTRKETRQSVDEDISAL
LSKFYPDDLISHLRKLVTSGGVVLNDTIAKSSYSGDTLELFAGDYACYSL
FAPLFDPVIAACHPRYNKTHKQPSDFNADHLREALGPSVLTEKNGDNVRM
ARLVASRNLCGYNYTPKMSVAQLREVERKVVAALNCLTGDQQGTYTTIKD
LKTNSALQEEMDIAELPQSYRLDERAGDLSCWPEGRGVFLNQDRSLCIFV
NVEDHVTIVATARQNGSQDGIAAIGCRAFALSCRALTNLGLDFEFDERLG
YITPSPAKLGTALAFSLVFTPATSARELDEIERQYDVVLDWAGSAHHGED
VPCIVFNKFSLGVSEVESIQEVIMASRCILHASNGAMNG
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Synonyms
Publications