Naga_100002g77, gene1855 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g77
Unique Namegene1855
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:524853..528135 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g77
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:524853..528135 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL106ngnoL106Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03150NO04G03150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1942rna1942-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1942rna1942Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1942

>rna1942-protein ID=rna1942-protein|Name=rna1942|organism=Nannochloropsis gaditana|type=polypeptide|length=1003bp
MFLSSKNQIYSISAGLKDTDRQGQAQTPGFDFTRSSKRKRRICLGKHYNW
STDLCDDLACASSADIPSRHISVRDFVQRRMAERDIRALTSSMKGVFSRR
ASGGDALGQVSATSGGIREDSTAEQKDKAADIVVAGRQKGSHEEDSLCVA
DGDTLKTLSVGVAAAQTPLTGTLMPVCQAPSSSSKTAAESEEMSSLGAEC
ESETDLATAGILDRKYSDTKPPEGKAQGAEEGAGEPLSSQPEPEPSAAPA
PHSECQDAEAVQLIGKAEVVVDREGERLASLVGVGGEQVVRSLEKSASFL
AAAAGGAAASLTSLIVSSPSNRPTRRAMSATAEERKPSSAQRKTRISEAD
GGRHGSSADGAEEASQPLDGATLSKYDGSETLSRNHPVFEMIRQRSHLSR
ASSEAGESRRESNPTPEASASSFSTSSPALIHSSFTEASCASGGQECPPR
SNLQEPATGTWKARGKEEGGPQELSSPFTTRRKTDYQYDYVDKLILKFTT
YSQDKEHSAFVIGKGGGSIGRDVKNTVSVPSDSTLQEDSHAFIGFKAGSF
YIKNLGVTHCAAIRVGAEPVVRDWPLVRGATFSAGNSIFLVVEITPTEMV
AEVIDGPLKGERLEVSQKGATLGRSPDNTLSIADPELSRRHSRIEYEEKD
GKYYLSDVGSTNGTYMQLAGPYAKAYNLSLGDEIMVGRTGFSINRYDYGI
SEERGRRKTMEDHTLVIQDLGVRALKRFGLAPQTFAAVFDGHGGEEASAY
LACHLHVNLREELERRFGAIEGDGRIESQELDAIVKGVVLEAFDKTDQDF
LGRSNVDAGSTATTVLIMGRRVYSCNVGDSRTIICRDQKLLLCSNDHKPA
RVDEARRIRQAGGFIFQNRVMGELAVSRAFGDRELKKCMQEIMAPDELEQ
MSLRDARSDGDEALVKDYSQPLVIARPEILITELSERDDFVLLACDGLFD
VFPNSEVIRFILEDMKQHHDAQRACENISYTAIHQRIAHDNVSIVLLVTN
NWW
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Synonyms
Publications