Naga_100002g85, gene1847 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g85
Unique Namegene1847
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:508050..514592 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g85
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:508050..514592 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0005794Golgi apparatus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL106ngnoL106Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03100NO04G03100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1934rna1934-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1934rna1934Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1934

>rna1934-protein ID=rna1934-protein|Name=rna1934|organism=Nannochloropsis gaditana|type=polypeptide|length=2180bp
MMQAGGSSWVAAARPDRTSVFLVDRKVAPRVVREVASEVGNSSHSSGTCS
LVSELECSGPIAQLALSSTITGHTFLAAFLDSGLMEIWDVGAAHGSLYSL
RDTVVLCGPPGEETSAGRRVMSTSGIVGGRKSLRSCVDYVASSSTGLSSA
IFFTVMRNHGGLPSGSNTPNHLRFVKLTPSVDEVRLGSQRLSSLDSTRRK
SHVLHLTCHESRPLLCVAFQDGVLHLYDISPLAREDGTQVTPHCSGEGEQ
QRGSDYDDEGDSDVETGQENDLSSLGRGASSFFSIRAARKLLLLPVAALK
CPGDFHGALSSVSFSLAPELVVAGSTRGEVAVWSMQLLQRREAQKGDRSL
SLTGAALPLQTCKLACLPARIGWISLLAEKGPFLFACLQKEDHSYEMQIA
VLLLLPTSIVMWDVIAPHKARFLAFQRRSSNLVLLEEHHDGGRVFFGGLA
EQLSQSSQMVPSRLAAMGQPQCMDQTFSGKLEGTSTLKVSPVTYSSVPYI
FWIQSRLTFAVRQSDSKADNLGKMTVTTNRKKGPLPSTGSFVFKAILATQ
TLESMQRERNEDLCDNDPIGATFLLPTYGDEFVGLLSSLGVSDSMSLHFG
LDDQTLLMPHSLLVSPDASTIIVLSSILKPGLNDKRVMGVTSPLAYVVVR
SGSRPSREEEENPKADTIKRGSFCFEDAGLTFDAVFLSSRKIALLQPTFC
ENARKGSVTTVVVQLQANRELDDPKKVWKVMRCTKAEDFVGHDGFKKRAI
TRLLTPCTFGASETGEASVHILCAAQKRATSLTQDGNYTNEELLKLTFYE
AAGKHTDHANATQSLCLFEDERVIEVHRRTSEGQCIESAIFAVATSQRLM
LLSADLAILACVKTYSKPCGLVWLGHTPVVSFVDGRVLYLSIDPHADSIS
RCGLRHLCSLEQMHAGEDSFLITALSDRLVYAAKCGEAREIRVLTRPLFP
LEPLLLGLLALPHRVLSTSSTACSTSRARSIDQSTMIVGQIREVLTCFGP
LAVPQDRYAREEGPGATTGATSWTCAALSRAGYNYWASELAGVRSLSDIL
CDGEPFPIVGNAHEENVRKSRPWLSFAMTIGLAAQSSQWRQALVEATGGI
IEKQDEVQQAGAMLPPRFRSGSHILARVGQRAWHAGQAEVALNLFDLAGE
DEKMAELLLLHDLDRIQFSDDHTGLLDNLCDLNSALQLMRRLVSSQTYTS
GREIKQNADIADVVGINLSSQIFPLDKQRRQSLLTGLQTSHQNIVSWQSS
STFSNIANTALTPTPQSVEGSTAYSCGLARPIPARYLLLNSVEEWLGRAA
PETLQDRVAGGSELDEDAPRGREEWVRGVGEGRGEEDNAILYLRFNDLNA
SPIPGDESSALLAQIGDLSQYGHTVTVAQGQPITCLESTCPIDQGDGVKV
QMGMDAFWNSVRVSEWIEEDTPSARRGFSALIARGSALDVGPYHGPQQSP
GRSRLTMEMWIQRPISSSTCSTPEILAVRRTLSSKPSCVWAFGVSADDAL
MFWTERCQTPLSTASGAVLGGKWTHVAFSLEIDASNSKQALVNLFVGGKD
VWPAQLRVEFPSLKDSDLRRTVLEIGPNLDGHKMTEVRMWACARSAEALY
DNRESYLQLAERKKKLTFKIRSDKSKDNRLGDSATATSSHPASLLPFAVA
DRNLGLPPYTSSTEPACLLNSSNGRRVTRLRGPEREANASRTSGNLDGSA
CGGMENLLNALPPPSCDGTGRQRSRRGSPNSARQVPTPFPARSGKGDEAS
GGLGEASEPFSLPYNKAASEEFDCLRSTTAHRPISPRPLERHLILLPEEL
DVNPANVMRDDMAGYFACGGRHLCFREEFSSTNENDQPRQKVAIVVLEIA
ASRGGPSRRDRYPFEARSAILVGGLSSWSRETEPLPSALIACYTLANTSQ
SNASAAAAGSNKTSQAGVLQVYDLVLRKSVARQPVQTTLHFWRWLDRGCI
ALVTQRSVFTWVLNLEGGSSRAPTKLFDRLDLSSSGIDSKVREYCHSVET
GWGVLTTVDSEQCRLAIQLHEFSTGKALFLTDADLLGANVCDCGVAGHGG
SKVCLVLLRSAPALCVDLCTICEEGDRDNTQDVCLDRLVRIFLPSTPSRV
APAGRAWVVGPAGPTGVLSILFAAKGHLYTLDLITHEIQARGSVFPDGRS
SVSDVDLDATSGDLLILDHERLAVFRISNL
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Synonyms
Publications