Naga_100024g37, gene1537 (gene) Nannochloropsis gaditana

Overview
NameNaga_100024g37
Unique Namegene1537
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1031111..1034487 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100024g37
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1031111..1034487 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01530NO01G01530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1598rna1598-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1599rna1599-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1600rna1600-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1598rna1598Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1599rna1599Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1600rna1600Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1598

>rna1598-protein ID=rna1598-protein|Name=rna1598|organism=Nannochloropsis gaditana|type=polypeptide|length=457bp
MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTV
KGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQS
LKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMD
GDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDG
NAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERF
MERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLL
AERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKK
KADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALR
IADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQ
EHAAVYR
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protein sequence of rna1599

>rna1599-protein ID=rna1599-protein|Name=rna1599|organism=Nannochloropsis gaditana|type=polypeptide|length=577bp
MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTV
KGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQS
LKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMD
GDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDG
NAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERF
MERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLL
AERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKK
KADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALR
IADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQ
EHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRN
LLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKT
TISYRPVHKHTLDENEVKPVPPFKRVY
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protein sequence of rna1600

>rna1600-protein ID=rna1600-protein|Name=rna1600|organism=Nannochloropsis gaditana|type=polypeptide|length=647bp
MLRSVGKRLLGSVAQVQRRAIHASSARLAAISGVPPEGKVSSTPNAKYTV
IDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGI
NAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYG
LPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGR
SLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLAT
GGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCL
ITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRG
VGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTV
HYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGAN
RLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVR
FASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLK
VTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSER
DDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY
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Synonyms
Publications