CSTF64, gene1523 (gene) Nannochloropsis gaditana

Overview
NameCSTF64
Unique Namegene1523
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:993761..996982 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100024g53
Gene biotypeprotein_coding
GeneCSTF64
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:993761..996982 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01670NO01G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1584rna1584-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1584rna1584Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1584

>rna1584-protein ID=rna1584-protein|Name=rna1584|organism=Nannochloropsis gaditana|type=polypeptide|length=1008bp
MANSSKLEWSKVTSDPLSAMLNATRVQDEDDEDKSGQTTEALSPPIPATQ
GPGMALSTSLGARDLVVDAALTPPMPPVSHPPPPCPPLYASSFPSSLRPD
LNSRKQNMGGVLNNLGNFLSSGLENITQSLTTAGTTNGNSSSDLSDSLAS
PSVSSSCTPASGEACVEDIGSPPPPIPDFPPVDHSSAHPLSPAPVAAPPG
DKALAQVGMLTGEQRLAFVPTLLLQAIPGGPLLSGDLLVTTYRIQFLPLP
AAPRPHQVAHLPPEYFRVPMACIDRTDRELNRRPGPREPNSAVVIHVKDG
RVLRLLGPEPPPTLRMPSPSPPTSSPSARASNPSGPSGRFVGDAEAASPA
IGLGRIKDLIDAYAFPQDIHKHLFCFTHFRALRLAQSPLALAPPDADLYD
LRREWTRQFTRRAPNGSSPCWLEDPSCPWRFSRLNAEGGTCPSYPSTLVV
PRAMSNEELLLSAAFRSEHRLPVLTWGAAASSASIWRASQPRVGVSGASC
PEDEKLLRLIGEGGEALPAWSSASPTDGPLLQAVASPARSRLSPSRRPRQ
GILRILDLRSKTAALANRATGHGYESTSSYPTSTLDFCNIGHIHDMRQAQ
HRLRSLTFSKDTVEVEWGASVENSRWLSYVRLVLHAAYRCASLVHRERAS
VLLHCSHGWDRTSQVAALAQLFLDPFYRTLRGFQVLIQKDFLEFGHPFQL
RTGHGLPAGGFGGGGGGGGGGGVGGGATRNDDQISPIFLQFLDCVWQLQQ
QHPQCFEFNSRYLLCVAEHLYDCRFGTFLGNSAKERPSLNHAAAPSLWTF
LEQPAVRKRVTNPCWGRWGGSEGNAQAQVKRLIETPLSALLRRVRLWEDY
WLRWTAKPCHPLEAYEAMRMEGGVKGRGEGAAEEENIDLQLSWAWVEEEE
ERAYWLQALRCGSSAYANGGDGVGNGTNAKKVEGVGVSGGETREGRRGGV
ALMTLPSDVEGDESESLEGGFVEGDDGEEGAEGREDEDEESVQVGEDSKE
HVNGLLAL
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Synonyms
Publications