Naga_100091g1, gene15 (gene) Nannochloropsis gaditana

Overview
NameNaga_100091g1
Unique Namegene15
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:49328..54037 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100091g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:49328..54037 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00120NO02G00120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna16rna16-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna16rna16Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna16

>rna16-protein ID=rna16-protein|Name=rna16|organism=Nannochloropsis gaditana|type=polypeptide|length=626bp
MTLSPTQERPPSKLSDLLKDAVFDVEKAVKTASFAFSVYGAPKINTWYNV
QGGTRLGLPQETVRRNFAARLRVTVLRAKDLPKESKLADYILSGSMPDAY
ALLEVKSKWGYDQGRTITIPDSNAPEWTDPATATSELLVEDLSTATLEVS
LRDENRLGKDSVLGQASIPPPEIPAMHSSWTGWLPLKQAENKLGKGKVEL
RVETLPAVRAGEGIELSESSANLGTSIPWTNDNGLDSDEEDAEAPRSTEA
DLDWNAMAAKLTNASLSLRKYRMAVFFTNESTDTQGGIWWRKSTKEVILV
FRGTEITSLQDVMTDLNIVQTPLGDGDKRLVHTGFWTAFNSIVDGAYHSL
EMAVGKGEDWAKGGWTIDCSGHSLGGALASLMAHNIAHNYPELCRNNRLH
MYSFGAPRVGNPAFCEEFNMLLGHALFRIVNKADVVPRMPGRNNLGSIEY
DHFGFCVLITDEALKSVSIYLDGQRNQDEAASAPSSNPPSDPAPLSPSDE
TLSSLVGEGVPVSAATAAVDNSKEETKKTTISDMLNVASTNIKTLGGFLQ
GEPVGPYERMDKGMPAVPVRRGTIPVPLNVAPEVAMGESLLEADVRDHSE
ISYFEAIQKFAALIVEEQKEEKKQEA
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Synonyms
Publications