Naga_100203g1, gene1404 (gene) Nannochloropsis gaditana

Overview
NameNaga_100203g1
Unique Namegene1404
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:671482..674809 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100203g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:671482..674809 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02930NO01G02930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1454rna1454-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1454rna1454Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1454

>rna1454-protein ID=rna1454-protein|Name=rna1454|organism=Nannochloropsis gaditana|type=polypeptide|length=558bp
MELEYHALVKRYAKSGAARSHLPLSAAAENAEESKVAEGVNGEGDAGHGT
TESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPLEKLLRE
RGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPL
EEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQ
AFALAQALDRERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRR
VHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPFKPSEKDEKSSGNVDESGV
ISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEKAKQKWLAE
NMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTI
VRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRR
LIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLH
GAVTAQEAQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRKKGAP
SAPEVSGP
back to top
Synonyms
Publications