Naga_100287g8, gene1131 (gene) Nannochloropsis gaditana

Overview
NameNaga_100287g8
Unique Namegene1131
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1400382..1402380 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100287g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1400382..1402380 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL050ngnoL050Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00450NO03G00450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1174rna1174-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1175rna1175-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1174rna1174Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1175rna1175Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1174

>rna1174-protein ID=rna1174-protein|Name=rna1174|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MKLWDVWSAMKFSPSSIFRVAFTSSVPSQDGYCILYLFQGAVVNTAGKYA
GALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQ
VLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYFTFEMW
EAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHGGQRNGNGT
QNSGDKV
back to top

protein sequence of rna1175

>rna1175-protein ID=rna1175-protein|Name=rna1175|organism=Nannochloropsis gaditana|type=polypeptide|length=265bp
MRISSHIFVAMRRYSPAYYLSHGQLFVLGSICRGKHGHQGRTAKMDMDMP
GMDMDMPGMDMGGMGDSGGFCQGEGSVMNNGFVFMPQDGYCILYLFQGAV
VNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVV
TGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAA
GYFTFEMWEAYRVANKKQLPSAIGAIGGGCGCVDEVIHVAAESTIHPGHG
GQRNGNGTQNSGDKV
back to top
Synonyms
Publications