Naga_100006g14, gene1111 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g14
Unique Namegene1111
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1327749..1332880 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g14
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1327749..1332880 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0006950response to stress
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL050ngnoL050Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00200NO03G00200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1154rna1154-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1154rna1154Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1154

>rna1154-protein ID=rna1154-protein|Name=rna1154|organism=Nannochloropsis gaditana|type=polypeptide|length=1563bp
MPRIEVENVPVDFPFQPYLAQVTYMEKVVAALKDRTNALLESPTGTGKTL
SLLCSTLAWQQTYSPERDGASSCCGNGGTGISNGSMTLMYETDAGTPRSF
PPTSGAGINNHVKGVQGKPVIVYASRTHSQLRQVIRELKATGYRPHTVIL
GSREQLCVHPEVSKLKGGLQNRRCGVLTQSRACRYKNNLDSYQAEHVGGG
SPGVMDIEELKSLGQTKLVCPYYLMRQNTLHADLVLMPYNYLLDAGSRQP
YQVRWTNSVVIFDEAHNLEGVASEAWSLALSTTMTARISEELEKAWEIVK
VKGEGVVSKGGEKGGGKAGGAAYGTPAPTKEDLVWLKRAFRALEEGIDAI
QLTVTGGYKPPSFSSSHVPAKSAVLGPQKLQDLFYGAGLGGLQPVDFHAV
VSRLERTINFLMDDAIVGGGNEGGMGIVSTLFTGGALEAFLKAYKMIYFW
GDTLTMRKNMQAYRLYIESGGPSLSLTTGAGQRPLGTGGRGQGSGGNRRS
SFPPVAQDPPRRVLHYWCFCPGIALEQLLQLSVRSVLLTSGTLSPLDSFA
SELRIPFPVRLENQHVIDTSVQTFMSILSRGPRGETLSSSFQRRGEDGYL
ADLGESLIRVARGVPGGMLVFFPSYGVMDLCLRQWKKGEGKGAGGGVYER
LQRVKTVVEEPRKAAELPACILAYDGAIKEEGGAILLAVCRGKVSEGMDF
ADQRARAVVITGIPFPPARDPRVGLKKMYLDSLASSPASVPSSIQPLRGM
EWYQQQAARAVNQAVGRVIRHQNDYGIVLFLDERFAAPAQRASLSQWVRP
HVSTATNFEEAMEGIRKFFVRVKGISRLVPRRRVGAGARASGTRGGKEGD
EDEFDEEWEEEEDGKWNAMESVQVSGRNRKGAGFRARNRGAVVVNVTKVD
VDAGYIAPEAIEQELLPSSQAGIGGKKVALQRFLEFKSALKQQERVTQVM
EGKPLGPRPSTLSLLLARKEAVLSKDSGSTGAVSDRESLREASDCEVRSP
RKIATSAKCGTSLRETKRETVGIPGKESLMRQASLSEQLGLTRSVSASDS
STSSRPSSFQDSTNFIPGVRVCGIASGGSNGDGEKAADKLMIGKQQRSSF
SFPSSVSPSSVCFVPPSLTRPRKASALNSSISAVMVDLRRDEQGVDGPKE
DGAEDGGDNNTARGRQGEILLQKTGPPSAVRSHIQIPSHQSPGPQGNRTL
LKNAENCSGCSTEELVAIPPSVSTCSSHGLHNMGERAVQSKSKGDKVEIV
DGATKQNGFRKKEERPGKSGGEQKAELDFVEMQEWLEGAKAKLSPDRLLI
LQDRVKEVLKGKVQSLKDFQAWTSAAKGGAVDVLLSTGADPTFLSRFAQS
YLSSFLRPVFDGMVKTRYKPYSRTPLARIGARSASVTGMVATIEQDPNSS
GKTNVFIAPGGEEEYLVCRPAKKVKETNNIKWEGENTYDKKSIITQNGVE
IGSRDEEVIERLQHLVDQGLGGSRSGSKKMKAKEENGSHGNRQQKCPICD
ETSCVFVSQCGHTACMPCWKRWLNKKGREEKGAKVGLCFYKCGPVTISSL
RRVLAGPVKDAAL
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Synonyms
Publications