Naga_100006g66, gene1061 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g66
Unique Namegene1061
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1181211..1189041 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g66
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1181211..1189041 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01290NO03G01290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1101rna1101-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1101rna1101Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1101

>rna1101-protein ID=rna1101-protein|Name=rna1101|organism=Nannochloropsis gaditana|type=polypeptide|length=1790bp
MDSYFEVSKARVRPVARVQMSVLSPEEIRRMSVTQATTVDRQPLPAGISK
AENYFNGRPVYGGVNDPRMGSLDRRDPCKTCGCTYNQVGQRNRVNECPGH
FGHIELAKPVYHVGFVDDVLRILRCVCYNCSRLMIDPKDEMVKRILATRR
RAARLKALHELCLKGSKRVCVGSPVPEGVSADPLAAAAAAEDQGCGAMQP
VYRREGLRVMVIFPDVAEGGAPNPDRKQYLPAEEAYRIFKNMSDDAVEML
GLDLRWARPEWLLITVFPVPPPHVRPSVVMDGSQRSDDDLTHQLATIVKA
NLKLLDAKKKGEPRDIQEKLELYLQEKIANFFDNERANADQEKHKSGKVL
KTIRQRLRGKEGRIRGNLMGKRVDFSARTVITADPNLQIDQVGVPRSIAL
NLTVPERVTRLNIQELQQLVENGPDVHPGAKYVVRDDGTRQDLRYAPSTS
GVALNVGWTVERHMRDDDVVLFNRQPSLHKMSIMGHRVKVLDWSTFRLNL
SVTTPYNADFDGDEMNLHLPQTLNARAEAEQIMMVPRNIVSPQANSPVMG
IVQDSLLGCSRLTRRDTFVERDVMMNILMWVGSLGIEHQAPVPMPAILKP
RPLWTGKQVFSLVLPKGCNHRGNSNMKPPPKDELNSNDSQVLIQDGEVIT
GVIDKRSVGNSAGGIIHVTWLDHGWKETARFMIQVQHVVNYWLLQNSFTI
GVADTVADTDTLTNIAKEIEIAKGKVRRIVEDAQQGRLEPQPGQTVFSAF
EMNVNTLLNSLTERVGEMARNSIDYTNNIVAMILGGSKGNNFNITQIMCC
LGQQNVEGKRIPFGFARRSLPHFSKDDYGPESRGFVENSYLKGLTPQEFF
FHAMGGREGCIDTAVKTAEVGYIQRRLVKFMESVQAKYDRSVRTVRGSVI
QFLYGEDGMDAVWIEKQSLRHLELNRRAFEAKYVLDVLDDSFGQVPGRPG
EFYLTESVRTACRRDTATATMLQEELSQLLDDRTRLARVLTARPRGKETD
TYLPVNLDRLITTARRNERITDKTQSDLDPKDVINAIRDLCNKTVVVPGD
DAFARTANENATIMFHIFLRSTFAAKRVLYEFRLTSVAFKYILGQVEDHF
IQAQVSPGEMAGVQAAQSIGQPATQMTLNTFHLAGVSAKNVTLGVPRLNE
LLNVAKTVKTPRMSVYMYPDAASDQAKVIRLGQHLEYTTIEDLTLKSEII
YDPDPKTTVVAEDEALLEYWYGVDVDGEAEGEGAASPWVIRIELDKDKVA
AKRVQLEDLQALIIDVFGPDTFQIIVSDQNMPRQVLRLRFVPDDEEDVDI
EFLKSVEEQIRTKLKVSGYDKILKVYGLTDDIKTWSPETGFSDRKEPYFV
THGVNMMEVMACADVDFTRTTCNDLIEIFETLGIEAARAGMLNEIRSVLF
FDGGYINYRHMSILVDVMTFRGALTAVSRHGINRGEQGPLLRASFEETVE
VLNQASLFGEYDDVEGVTENILLGRIARVGTGVVELLLDEEKLQDAQEMP
ELGGGFGVLGGDEDGIGGIGAGVGGATPGTLTPGVATPYGAFGYGAYGAG
GASPGAMLTPGIHLGGGKDLSASPLNASPFVSPMVASPGRATPGYEGGAS
PFVGAASPYVSASPAYAGGYGSVSSPAVGLGSASPAVGGYSPSSPAYSPS
SPSYSPSSPAYSPSSPAYSPSSPAYSPSSPAYSPSSPAYSPSSPAYSPSS
PAYSPSSPAYSPSSPAYSPSSPAYSPSSPAFSPTSPAYTPTSPQYSPTSP
AYTPSDIGSPAGVQEGAYSPSSPVYSPTAAMDEGDDVKKE
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Synonyms
Publications