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Properties
| Property Name | Value |
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| Locus tag | Naga_100006g103 |
| Gene biotype | protein_coding |
| Gbkey | Gene |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1085935..1103327 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0008135 | translation factor activity, RNA binding |
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
protein sequence of rna1065 >rna1065-protein ID=rna1065-protein|Name=rna1065|organism=Nannochloropsis gaditana|type=polypeptide|length=5587bp
MTFFGDDFGQKVDLTARIREILRNYPEGTSIFKELLQNADDAGAREVRLV
LDTRQHPTDRLASPSMASLQGPALLCWNDAEFSDLDFESIQRIGDSLKRA
ESQGAKTGRFGQGYNAIYHLTEVPIFVSGQNIVMFDPQASYLPNVNPANP
GKMIDFIKHRQVLEAYPDQFLPFQGIYGCNIVKGGDDNKSGSPYRATLFR
FPLRTPLQAETSRLSKQVHTVESMRAQLRMFASEASEMLLFLKNVEQISV
WECMATAATATQESRVGGETSIGLRRTAHVYIANITKDIRSKRDMARSVS
LEGRQGHTSGSRKLTTPPLASDYLLEIAASRAPSGHVSRETWIVCNRLGG
GKASELAAASENAHLKLIPWGGVAGRVLVETSENVNTSDDTTRSTVGLTS
NETEAQEFAALHETPMHGLAYCFLPLPVATGLPVHVNGFFELSSNRRDIW
WGDDMVGEGQLRAEWNRALLCDVAVPCYSRFLSLAAERCGAGALYDSLWP
VKGNGPAWVAMIDAFFEAVSPLPLLHTPLGEQEKGVWISPRDAVLIPSAE
GSRNKDGTIIFCRDDISSLEKILVEEDVPVVHTYLTALHEVLEKRKVVAR
IATPAFVRTHFRTPASSTSAPTNPCDSHPALKTREAVLFLLRYCLSDLSE
QSSTDLDGLPFLPVADALAGPRTIVSYTMVLDHQQKEISQLLSMGFPVGL
CLQACRIGGGHVDRALAHAMEQREKVEQSGDPFELGDLVLGIIPTTDVAG
EALIKVEKAEHDVRKEVCEEITLFAPVASRLLNFAELPDKARSILQASKV
QKVLNVRNLTATHLPALLRYVLPVAWRDVARVTWNGEETPKTQLETDGAW
DAPALGWFLRLWQYFLNKVADFSTFADSLPLLPCNERCVVSLSRKQPVLI
LPSVPGKISVALLTSLRELGVLTVHEELSTVIGEAKLTAALKGYAHAYGR
AGVLECLRLISAQQSSSQPQQQQKQFQTHAAFGRFLVQTLASKAPEAFSS
LRAILVSEPLSDLTQSDIDLIATLPIFPVYGGLEEKKAYMPLKSKPLYLL
EGICPSVLRPFEKLLTTRFLRIEDTSEDWLEEKGSGIDTLQCALAKKLGA
QTVSKVIFLLDHFFPYFSTFEPALRAQAMLDLVLNDFPSLVQANSRFLPA
LEQLNFVPNTLGKVARCQEMYDPEVEDLAILMGEEFFPQVDFARPDILPT
LRRLGLRSSLHYEDVLRIARSTHDQAQLRESEVQALLRAETLFLFLNQNA
ETFFVPIREQEVERGRSRKTSSAGLFSRALSLFNEAGRTEEKARQERLDE
DERKRGLMVSELHAIAWVPVLASKPFPYLPWRTTSTTVNSDSKQSSDKVV
SRALVAPSQARLSEDMWYSSTLFGIIPPETFVSELVKTAFGWKTPLPLSV
LARQLVAIAENFHAYSETEGHKNVGAWTANANGNIGDACCRGTDNAVQNM
QQAISSVVPVIYQKLSASLHNPSVMESELRRHLTGPWVFVGDRFVEAQQV
AFASQVNATPYLYSVPPDLVCFAPLFKELGVRASFAPSDFVNVLQMMAAE
TYATRCEFTQTWIVPDRNTNLSRSENVCLRPAQLELAITLVQRLSDEIIQ
VSDWEIFAPDEGGKLARATDLVYDDAPWLSKKIQRRPDIRYAHPKISSVT
GEKLGIRSVRRLLMETHADTMDFGLSGAEAEAFGQSEALTSRLRHILELY
PEGPSILSELIQNADDAGASTVRVLYSERRYGTSSLLGQKMADWQGPALY
FYNDAIFSPQDFQNIARIGQASKLDKQNSTGRFGLGVNAVYHSTDLPSFV
SGEHLVIFDPHVKFLPGATRQQPGIKIRFVDTDLLSQFPHQFEPYTVFGC
TLQQTFSGTLFRFPLRTADLARQSEISKSQYDSTTIRHLLASFKESISRF
LLFLRNVDNIEVYVAHEVDDLTLKPGATDNSLKAESKPRLLYRASRSMDT
RETWAEISAFMTGPSRAPLSKEAFHAKLASTPTLHLPRSKQLMEVRYEDG
DSDFLGCPISSRVRRIDEYLVFAGLGGGAALAMAVDAKHRHLKLIPFGGV
AAHVYTRQSTLSSLNCDAKDNYGPRRLVEVIPKRGQVFCFLPLPVDSGLP
CFLNGSFELSSNRRDIWAGGDMAGDGKLRSDWNQALLQDVVAPLYVQLLH
CIGQLLGPADDNKHEKSRLPFYYNLFPLGQTVPAHFQVLVRQFYRLAAPL
PLLWSDIGGGTWTPCQSAMLADIPQDYQVEDDTDRTTAHLCNVLLARGFC
VVRVPESLKRMLVAEECCHSEMCPNLVRMLLWEARNLATNAGNPTNGGVL
RDSWPATQGDAQILLVYCSSDLVGKGDLTPLDGLPLVPLADGTLGYFAVS
PLNAVDQRSPNRKRKPPTYFMAEEEERGLFMHGQHVLVVERERLLPKVAA
LFYNVALIRNTNVFHLSPTNIESLLSEVLPPVFEEMCEVPWNPGDMLGGR
VVPDSEWIYRLWSYLANSRGLVANSKSSCMQSLQSIGAKTMMLNSTVTGI
SGVSVRDREQSSKSIPTIAVQDIARVCGNWPVLPILRDRSLGSMLVRIDP
SLPLLYMTQNMFPSSSDGIAKLERALASLGICVVNQRMLPEIAGPIFMAP
ESKAVVKNLNTLEVLELLAKCCDRQKLGSSVGMLFSSVGTAGRRALRTFF
GDARQIEMVVREREGANSVLGSTDSVVQALRALPIYESYEGQELSQGQKR
IDQSLPPMAAFCALTSPEHWLPPEGVDPLLLDTGSPTFIRTNTQEDSALL
NFLGVNPLPMAKFYRKHVLGALNSIPATVRDGAILKMLLNLPHLAQDKGA
DGEAFLEELKVMAFVPNGALPVAELRRACELYEPMQGGLENLLDGDAFPA
PALCTPEIIPRLRELGLKASLSLHGIILSATSIASMAGLGERERAVKRGR
DLLRFLDHHIEELAEDYMERQRSGFDEEDDAFDDVNDDLNESSGGPASSP
GHCHYRSCVTLPRTFVVALRAPSWVPVRQAPLHPSLPWPCSSSSSRAALP
VVLPPCQTRPQSEMWQCSLRKGIAELDVSSPLLRQALGWDDVLDPILLAH
QLVGLSVAFENGRSGNFRLILNKCVPDIYKALQDEIVIQASDVEGPSSPT
IPKSDHHTIPRLREDFDKVLKIISGRAWIWVGDEFLPTTRIAFCAPTNAR
PYLVKVPPELEMFAPLLRLLGVQESFTPQDIVKALEAMYVSAGGDVPLSS
ADLTQSLALLNALYKTPIDERTKALQEDGVTVYAPAEDGTMHRIDELCFG
DAPWLLAAMPQGQINLKFVHGGVKKDIARSLGARSLREALLAIQGVMASI
PCACSQDILSILTPALLHASQDEGRSRITAELGYQAIMDLVELADDVGCP
ELEMLLDEREHKKESLLHPRLAETQGPALIIHLKDVVLGFDDLIRLTSPS
RLRNRPIIRPYPPSPKASLGGSYHGASSHLRGLGGRDSPCNTDQERQSQH
QQSRRLEQKLQEEDRSSGGYGWPVAGLGLCSLFHLTDVLQVLSGDQFVLF
DPCGSHLVSEVEVERLRHQDSQETEPHNVEGTRRKSSSPERGKEQEPIAR
RYILGGQNLHTRFLDQFAPFMSLPSWTSIEDKGCLPEDSSFCFTGTVFRC
PLRLYESALSSLVPVLNELEPTLSRISNSAPASLLFSLSLKTISAAKWSR
DATVSHPLMCTTLIDPSVAVLHRERRKLLENKDWRRFRLSHLWKGGNPAP
MDIQVVELACEAGDKQPWREQWLLLDTLAHGASREAAMSEASRIISDNPL
LPLVSAAARLEIRHDDIPHGKGDRWSASRPGRAYSVSDTGSDLGFPCHVN
APFFLCDALQPILKERVSTGRVSGVSGGSVWRGNGVEKLTLCLKWNNALM
STLCDEVIPALMASLRELTLQTDGCGRGLYEYWPYLNDVAKRLRGRVQAS
GLYDRLGNGSYFLLDQQPPGSKKGLDSRGKGTSGRFVKVGDAIFFNNEVG
SPELESFVGKLFPLFNIPYRVARELQDRQFAIKEVTPALLRRKLHSSSLQ
IYQEIISKPTLALELLVYCLSDCITTHIEAEGLTVCRSRWNDLVGLPLLL
LEDGSVVQVPSSKSKTGGYILGNEAQKSLLPHCKNIFIASRTVECLGKLK
DEPNFLAAVGFRKFNPQALASNLDTILPPSWKNLVRLQIDWDRIPYPLTP
LWFYRFWREMPLAQATELLASWPLVPICNSTAAGTSPRRGSIELVSCVLS
LHVLRLLPDFCDTRLRADLEAQDAEASRSAMRTCESNQIRADVAFLSKTV
TVGEEALARNKSLKSHPRDICLDMEDLEKLSRACEEMLLNRNPHGERVSS
VGGNSPAPGIPSSSLSESAESQDAGSPILSPVSANVPEEGMRERVLANQN
HPNVRMENTNERDASDGSQDAEEGRTEHLNTLMGHVSMTKAEHEKRLELL
RLLSRARAPLLELAFFPKAVVDSLVTADNRDVTRAIITCMHVFKEGLKLD
NLSGAEIDHMIRRCTTSSQDGNVATALTASELEKLRQLPFFETITGNRVP
LVQENGPYVVLDDRQIGRDRFLDEIMAIIDMSTTFRQFSDRPGSVVVQRT
RFEVNSCDNSPALTECKVLKRKTALEDLYQDLGVATLKKTEILTRLLIPD
LALMDPGLRSRVLDLIKNMWISEKLASDTAFVEALTAAKFIATEKGDLAM
ASAFLDPRNELLREVFEDEPSVFPPGEFGSRDWLPILGVLGLKTKCDGKI
FLECAKQCEKLASLDPLPFATAWKAAKLMAYFVAPDGDLCADKGLTRELA
PIRCVPVERPGLDMMGSCTTSEQYQGAMASSGAGEAKPVGDMLMAPSRKY
QLVSFAQAAPAKDGNLVWSIAPVLLPHLVPPQLCWSILGLVSPPSCELVV
QHLINLCTGISMPTRTRRATMVYADDALPDDGECSALDRWTYREPPTVVF
QSIFRYLEEHWEGLPPKSISLLKQLPCVPVGNRLVKAARLYFRLTQDLSP
FMFEVPRAFGAYDTLFTALGTRVSPTVQDYSSLLMEVQGECGNCALNPNE
LEAVLKIVTLLAETLSMQQNGPRKGEGGICGNGLLHSLNLSLPDDRSVLV
ALDMVLSDDASWLRGRVHAHRLRVVHPRLSQELCQLFGVSRISEVVREEL
EADFVPETVSTFSTATGDPALLSATLTSHEFAHALACLMLTQQQRGVASR
GTFLLSSRLSPPCSEGSDRNSVTLEDLINKIRGTLRGFEVKFVRALRSRF
LRRHDGSDEEEDITSQSEGSIEYVDRANRIIMLAVTSLPSSIAPAYVLAL
AVAQIFDLGGRDEEWLVAPMSALLATYPPEDISQVMNLLRLKSRDEIRAQ
HMHRGAPGQHLLDIDRQRLIFRPMRIYTEGEIVAWQSGERNAANTFVTEG
EDSMETLRYGVVVSDAGTEDDSERPGMAAGNRGSVRPLLIRTAFNKVQEM
LSTQVYSFSATRKGNSVPENDRALPATERFRTQAKLSKLRLLQDVKEEEK
EKAVCPRDITAIDLPAPVGGHQLLAAVDDILSRVNLTLEEDAKEVLARNI
RLQRDLESARDETQSVREEMLELSAKLESIKSAFQCHICFQRNVNEILAP
CGHTTCTSCRESVRVCPFCREAIKSFFPFHTNNFFDR back to top
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