Naga_100050g15, gene1005 (gene) Nannochloropsis gaditana

Overview
NameNaga_100050g15
Unique Namegene1005
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1032810..1035517 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100050g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1032810..1035517 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01820NO03G01820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1043rna1043-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1044rna1044-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1043rna1043Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1044rna1044Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1043

>rna1043-protein ID=rna1043-protein|Name=rna1043|organism=Nannochloropsis gaditana|type=polypeptide|length=532bp
MLEEGGEQALLARLLETMGRESLSEQTLDSVLRVYCTHVQPSFAAPWQRL
QQISSTSSGFVIEGRRIITNAHSVEYGSIIQIRKRGCDIKWVAELLAYGP
ECDLAVLTVRDEAFWEDLYPLAFGELPALLDDVSVVGYPVGGESLSVTAG
VVSRIELQEYAQGGETLLAIQIDAAINSGNSGGPVINDQDKLVGVAFQSL
SSHDTENIGYVIPVDILLHFLADIERHGKYTGFCRLGVKFQPMESPALRR
HKALSPGASGVLITRVDPLAPAHGLLRKGDVLMGVDGISLANDGTIPFRK
GERVELHYYFSQLFQGDTVQLRIWREGITQDIAVPAYIYKLAVRPHLNNE
MPSYFMVGGMVFTVLSHPFLLSNLGETYAPETDADVRLLSLIQSPLQEPE
QQLVVLSEVLEHSVNLGYELFHRQHLTLFNGEEIRNLAHLVSLVDACREG
EMVFEFDRGEILVLDAGAAHKATQEVASTHGIPASRSTNLVAPEGGTLAP
PTSTVAAEDAKMKVKKSIAPPIEAARTSTASQ
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protein sequence of rna1044

>rna1044-protein ID=rna1044-protein|Name=rna1044|organism=Nannochloropsis gaditana|type=polypeptide|length=630bp
MRYFSSVLLLLSGSSLSFSFLPPLPSSRLDSAHPASRHRPCSPGLSAPLS
AKTSRTDQNGMSYVRRPHIYRPGKSPELSTSSSNKAALAAETREGPDGML
EEGGEQALLARLLETMGRESLSEQTLDSVLRVYCTHVQPSFAAPWQRLQQ
ISSTSSGFVIEGRRIITNAHSVEYGSIIQIRKRGCDIKWVAELLAYGPEC
DLAVLTVRDEAFWEDLYPLAFGELPALLDDVSVVGYPVGGESLSVTAGVV
SRIELQEYAQGGETLLAIQIDAAINSGNSGGPVINDQDKLVGVAFQSLSS
HDTENIGYVIPVDILLHFLADIERHGKYTGFCRLGVKFQPMESPALRRHK
ALSPGASGVLITRVDPLAPAHGLLRKGDVLMGVDGISLANDGTIPFRKGE
RVELHYYFSQLFQGDTVQLRIWREGITQDIAVPAYIYKLAVRPHLNNEMP
SYFMVGGMVFTVLSHPFLLSNLGETYAPETDADVRLLSLIQSPLQEPEQQ
LVVLSEVLEHSVNLGYELFHRQHLTLFNGEEIRNLAHLVSLVDACREGEM
VFEFDRGEILVLDAGAAHKATQEVASTHGIPASRSTNLVAPEGGTLAPPT
STVAAEDAKMKVKKSIAPPIEAARTSTASQ
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Synonyms
Publications