EWM21020.1, cds9653 (CDS) Nannochloropsis gaditana

Overview
NameEWM21020.1
Unique Namecds9653
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:151851..153367 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21020.1
ProductN-acetylglucosaminyl transferase component
Partialtrue
Orig transcript idgnl|cribi|Naga_101016g1.7260.mrna
GbkeyCDS
End range.
End range153367
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:151851..153367 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0017176phosphatidylinositol N-acetylglucosaminyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006629lipid metabolic process
GO:0006506GPI anchor biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR007720GlcNAc_Gpi1
Homology
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|585101021|gb|EWM21020.1| (N-acetylglucosaminyl transferase component, partial [Nannochloropsis gaditana])

HSP 1 Score: 960.288 bits (2481), Expect = 0.000e+0
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0
Query:    1 MGTLAPAGELLVHALPGREGGREGGKEGRDAGQGRDEGSGGGKRKRRSERQEKRKGGSASCPLRPQPAGRPSPPPGTGLALPSAPPSPPPSPRPALLPPDSASLPPRPSDPHERSNQLRARLPFLLLDHVLGLFLALAFFPSHHLPPFLAFLPHHQDPLPLSSLDASPFSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPLLLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDSLWIASPSPPPPRPSPPPPRPGCDESGRARREGAVGGQEENWSKSGEGRGDGGEGERSTVVGRSRGRAGGRAGSSTPQLLLGTLLFTVLALLFLTVTGLFTVLLGLQARAVGLQVLLWALFVMWREGPWGGYGGMEGGTEGGEIGVMVQVLGGEGEEDKEGGKGGGEGGEESVVRVYGGCELPVEEGPSEEDGGREGGDGGGREAREAPQGPAL 506
            MGTLAPAGELLVHALPGREGGREGGKEGRDAGQGRDEGSGGGKRKRRSERQEKRKGGSASCPLRPQPAGRPSPPPGTGLALPSAPPSPPPSPRPALLPPDSASLPPRPSDPHERSNQLRARLPFLLLDHVLGLFLALAFFPSHHLPPFLAFLPHHQDPLPLSSLDASPFSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPLLLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDSLWIASPSPPPPRPSPPPPRPGCDESGRARREGAVGGQEENWSKSGEGRGDGGEGERSTVVGRSRGRAGGRAGSSTPQLLLGTLLFTVLALLFLTVTGLFTVLLGLQARAVGLQVLLWALFVMWREGPWGGYGGMEGGTEGGEIGVMVQVLGGEGEEDKEGGKGGGEGGEESVVRVYGGCELPVEEGPSEEDGGREGGDGGGREAREAPQGPAL
Sbjct:    1 MGTLAPAGELLVHALPGREGGREGGKEGRDAGQGRDEGSGGGKRKRRSERQEKRKGGSASCPLRPQPAGRPSPPPGTGLALPSAPPSPPPSPRPALLPPDSASLPPRPSDPHERSNQLRARLPFLLLDHVLGLFLALAFFPSHHLPPFLAFLPHHQDPLPLSSLDASPFSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPLLLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDSLWIASPSPPPPRPSPPPPRPGCDESGRARREGAVGGQEENWSKSGEGRGDGGEGERSTVVGRSRGRAGGRAGSSTPQLLLGTLLFTVLALLFLTVTGLFTVLLGLQARAVGLQVLLWALFVMWREGPWGGYGGMEGGTEGGEIGVMVQVLGGEGEEDKEGGKGGGEGGEESVVRVYGGCELPVEEGPSEEDGGREGGDGGGREAREAPQGPAL 506          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|803279934|ref|XP_011999633.1| (PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X3 [Ovis aries musimon] >gi|803279936|ref|XP_011999634.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X3 [Ovis aries musimon] >gi|803279938|ref|XP_011999635.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X3 [Ovis aries musimon])

HSP 1 Score: 81.2629 bits (199), Expect = 1.304e-12
Identity = 73/243 (30.04%), Postives = 101/243 (41.56%), Query Frame = 0
Query:  174 LQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPLLL-LGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDSLWIASPSPPPPRPSPPPPRPGCDESGRARREGAVGGQEENWSKSGEGRGDGGEGERSTVVGRSRGRAGGRAGSSTPQLLLG-----------------TLLFTVLALLFLTVTGLFTVLLGL 398
            LQ  L  L+  P G K+N  L   L    L   HL    S++   SP +  +L  LGL A  GL+  L++  D+  L T      +   AR+Y L++  L + WRLFRG+K N+LR R+DS        P P   P      C  SG  R       Q      +  GR   G     T   + +      AG    +L +G                  L+FT+L LL +TV GL  +L+ L
Sbjct:  320 LQHLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWI--SYIHLMSPFIEHILWHLGLSACLGLTVALSILSDIISLLTFHIYCFYVYGARLYCLKIHGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQVPAPSSRPSACTSPCSGSGITRGSFVPAPQAPGVQGAARGRVYTGPQRGRTRRRQGQTLVREAAGQQALELFIGTLLFTILIFLLPTTALYYLVFTLLRLLVVTVQGLVHLLVDL 560          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|803279932|ref|XP_011999632.1| (PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X2 [Ovis aries musimon])

HSP 1 Score: 80.8777 bits (198), Expect = 1.588e-12
Identity = 73/243 (30.04%), Postives = 101/243 (41.56%), Query Frame = 0
Query:  174 LQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPLLL-LGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDSLWIASPSPPPPRPSPPPPRPGCDESGRARREGAVGGQEENWSKSGEGRGDGGEGERSTVVGRSRGRAGGRAGSSTPQLLLG-----------------TLLFTVLALLFLTVTGLFTVLLGL 398
            LQ  L  L+  P G K+N  L   L    L   HL    S++   SP +  +L  LGL A  GL+  L++  D+  L T      +   AR+Y L++  L + WRLFRG+K N+LR R+DS        P P   P      C  SG  R       Q      +  GR   G     T   + +      AG    +L +G                  L+FT+L LL +TV GL  +L+ L
Sbjct:  336 LQHLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWI--SYIHLMSPFIEHILWHLGLSACLGLTVALSILSDIISLLTFHIYCFYVYGARLYCLKIHGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQVPAPSSRPSACTSPCSGSGITRGSFVPAPQAPGVQGAARGRVYTGPQRGRTRRRQGQTLVREAAGQQALELFIGTLLFTILIFLLPTTALYYLVFTLLRLLVVTVQGLVHLLVDL 576          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|1062957819|ref|XP_017895447.1| (PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1 [Capra hircus] >gi|1062957823|ref|XP_017895448.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1 [Capra hircus] >gi|1062957825|ref|XP_017895449.1| PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1 [Capra hircus])

HSP 1 Score: 80.1073 bits (196), Expect = 3.289e-12
Identity = 73/243 (30.04%), Postives = 102/243 (41.98%), Query Frame = 0
Query:  174 LQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPLLL-LGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDSLWIASPSPPPPRPSPPPPRPGCDESGRARREGAVGGQEENWSKSGEGRGDGGEGERSTVVGRSRGRAGGRAGSSTPQLLLG-----------------TLLFTVLALLFLTVTGLFTVLLGL 398
            LQ  L  L+  P G K+N  L   L    L   HL    S++   SP +  +L  LGL A  GL+  L++  D+  L T      +   AR+Y L++  L + WRLFRG+K N+LR R+DS        P P   P      C  SG  R   A   Q      +  GR   G     T   + +      +G    +L +G                  L+FT+L LL +TV GL  +L+ L
Sbjct:  320 LQHLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWI--SYIHLMSPFIEHILWHLGLSACLGLTVALSILSDIVSLLTFHIYCFYVYGARLYCLKIHGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQVPAPSSQPSACAGPCSGSGITRGSLAPAPQAPGVQGAARGRVYTGPQRGRTRRRQGQTLVREASGQQALELFIGTLLFTILIFLLPTTALYYLVFTLLRLLVVTVQGLVHLLVDL 560          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|734660123|gb|KHN97178.1| (N-acetylglucosaminyl transferase component [Metarhizium album ARSEF 1941])

HSP 1 Score: 75.485 bits (184), Expect = 1.087e-10
Identity = 43/126 (34.13%), Postives = 75/126 (59.52%), Query Frame = 0
Query:  169 FSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPAL-RPLLLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDS 293
            +++ +LQ++++ L+ +P G KLN  L   L  L L +  + +  S +   +PAL + +  +G  +  G S  +AL  DL  + T+   S +  +ARIY  +L++L + + LFRG+K+N+LR RIDS
Sbjct:  407 YTVEALQSSISWLMDYPAGLKLNGELAVFLGDLFLWV--IDYWSSCIETLNPALPKMVWFIGFSSFAGASMPIALFSDLLSILTIHIYSFYLASARIYHWQLTILQSLFHLFRGKKQNVLRNRIDS 530          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|1021059491|emb|SAM04443.1| (hypothetical protein [Absidia glauca])

HSP 1 Score: 74.3294 bits (181), Expect = 2.078e-10
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0
Query:  169 FSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAP-SPALRPLLLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDS 293
            +++ SLQ+ +   L+ P G KLN  L   L+ L L L HL      ++ P +P  R + L+G   + G+S ++AL  D+    T+     + V ARI++ +L  L A + LFRG+K+N+LR RIDS
Sbjct:  402 YTVDSLQSMMYWFLETPAGLKLNTQLGTFLSELFLWLIHLWTECMVVIQPWTP--RLIYLIGCSGIFGVSMVIALLSDMLACLTMQIYCFYMVAARIFNWQLITLYALFNLFRGKKRNMLRNRIDS 525          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|1126166497|ref|XP_019615078.1| (PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q-like [Branchiostoma belcheri])

HSP 1 Score: 74.3294 bits (181), Expect = 2.096e-10
Identity = 63/185 (34.05%), Postives = 84/185 (45.41%), Query Frame = 0
Query:  112 HERSNQLRARLPFLLLDHVLGLFLALAFFPSHHLPPFLAFLP--HHQDPLPLSSLDASPFSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPL-LLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDS 293
            H    Q R R+    L  VL +FL +A F          FL   ++   L  + +  + +    LQ  L  L+  P G KLN PL   L    L   H+     +L    P L  +   +GL    GLS LLALA D   + T      +   AR+Y L+L  LG+ WRLFRG+K N LR R+DS
Sbjct:  267 HCNDQQYRGRVCDHALSLVLDVFLGVAVF---------LFLSKGNYTKKLATNLIPFADYVATELQDLLHWLMGAPAGLKLNRPLDEFLGRFFL--YHIQLWIGYLYILRPYLELITWCIGLSGCLGLSVLLALASDTLSMLTFHIYCFYVYAARLYRLQLYGLGSLWRLFRGKKWNPLRQRVDS 440          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|908388728|gb|KND89409.1| (N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 [Tolypocladium ophioglossoides CBS 100239])

HSP 1 Score: 74.7146 bits (182), Expect = 2.187e-10
Identity = 44/126 (34.92%), Postives = 75/126 (59.52%), Query Frame = 0
Query:  169 FSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAPSPALRPLL-LLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDS 293
            +++ +LQ++++ L+  P G KLN  L   L  L L +  + +  S +   +PALR L+ ++G  +  G S  +A+  DL  + T+   S +  +ARIY  +L++L + + LFRG+K N+LR RIDS
Sbjct:  600 YTVEALQSSISWLMGWPAGLKLNGELASFLGDLFLWV--IDYWSSCIDTLNPALRQLVWVIGFSSFAGASMPIAVFSDLLSVLTIHIYSFYLASARIYHWQLTILQSLFHLFRGKKHNVLRNRIDS 723          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|758356790|dbj|GAN01193.1| (N-acetylglucosaminyltransferase subunit [Mucor ambiguus])

HSP 1 Score: 74.3294 bits (181), Expect = 2.513e-10
Identity = 44/126 (34.92%), Postives = 74/126 (58.73%), Query Frame = 0
Query:  169 FSLISLQTALARLLQHPGGFKLNLPLTHRLNALLLLLAHLLFLPSFLLAP-SPALRPLLLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDS 293
            +++ SLQ+ +   L+ P G KLN  L   L+ L L L  L  L +  + P +P +  + L+G+  + G++ +++L+ D     TL     + V ARI++ +L +L + + LFRG+K+NILR RIDS
Sbjct:  370 YTVESLQSMMLWFLESPAGLKLNHELGSFLSELFLWLIRLWTLCTQTIEPFTPQI--IHLIGMSGVFGVTMIISLSSDFLAFMTLHVYCFYMVAARIFNWQLVILSSLFNLFRGKKRNILRNRIDS 493          
BLAST of EWM21020.1 vs. NCBI_GenBank
Match: gi|367031896|ref|XP_003665231.1| (hypothetical protein MYCTH_2308744 [Thermothelomyces thermophila ATCC 42464] >gi|347012502|gb|AEO59986.1| hypothetical protein MYCTH_2308744 [Thermothelomyces thermophila ATCC 42464])

HSP 1 Score: 73.559 bits (179), Expect = 3.537e-10
Identity = 47/130 (36.15%), Postives = 75/130 (57.69%), Query Frame = 0
Query:  167 SPFSLISLQTALARLLQHPGGFKLNLPLTHRLNALL--LLLAHLLFLPSFLLAPSPAL-RPLLLLGLGALGGLSALLALAFDLCRLHTLPARSLFQVTARIYSLELSLLGAFWRLFRGQKKNILRGRIDS 293
            S +++ +LQ++++ L+  P G KLN    + L A L  L L  + +  SF+ A  P L R +  +G  +  G S  +AL  DL  + T+   S +  +ARIY  +L++L + + LFRG+K N+LR RIDS
Sbjct:  379 SQYTVDALQSSISWLMGWPAGLKLN----NELGAFLGDLFLWVIDYWSSFIEALRPYLPRIIWFIGFSSFAGASMPIALFSDLLSILTVHIYSFYLASARIYHWQLNILISLFHLFRGKKHNVLRNRIDS 504          
The following BLAST results are available for this feature:
BLAST of EWM21020.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101021|gb|EWM21020.1|0.000e+0100.00N-acetylglucosaminyl transferase component, partia... [more]
gi|803279934|ref|XP_011999633.1|1.304e-1230.04PREDICTED: phosphatidylinositol N-acetylglucosamin... [more]
gi|803279932|ref|XP_011999632.1|1.588e-1230.04PREDICTED: phosphatidylinositol N-acetylglucosamin... [more]
gi|1062957819|ref|XP_017895447.1|3.289e-1230.04PREDICTED: phosphatidylinositol N-acetylglucosamin... [more]
gi|734660123|gb|KHN97178.1|1.087e-1034.13N-acetylglucosaminyl transferase component [Metarh... [more]
gi|1021059491|emb|SAM04443.1|2.078e-1036.51hypothetical protein [Absidia glauca][more]
gi|1126166497|ref|XP_019615078.1|2.096e-1034.05PREDICTED: phosphatidylinositol N-acetylglucosamin... [more]
gi|908388728|gb|KND89409.1|2.187e-1034.92N-acetylglucosaminyl-phosphatidylinositol biosynth... [more]
gi|758356790|dbj|GAN01193.1|2.513e-1034.92N-acetylglucosaminyltransferase subunit [Mucor amb... [more]
gi|367031896|ref|XP_003665231.1|3.537e-1036.15hypothetical protein MYCTH_2308744 [Thermothelomyc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9684rna9684Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications