EWM21993.1, cds8681 (CDS) Nannochloropsis gaditana

Overview
NameEWM21993.1
Unique Namecds8681
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:639965..639988 -
Alignment locationKK037249.1:639649..639705 -
Alignment locationKK037249.1:639327..639464 -
Alignment locationKK037249.1:638885..639055 -
Alignment locationKK037249.1:638667..638723 -
Alignment locationKK037249.1:638445..638537 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21993.1
Productnudix hydrolase
Orig transcript idgnl|cribi|Naga_100670g2.7116.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:639965..639988 -
KK037249.1supercontigKK037249.1:639649..639705 -
KK037249.1supercontigKK037249.1:639327..639464 -
KK037249.1supercontigKK037249.1:638885..639055 -
KK037249.1supercontigKK037249.1:638667..638723 -
KK037249.1supercontigKK037249.1:638445..638537 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016817hydrolase activity, acting on acid anhydrides
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
IPR024195NUDIX_hydrolase_YfcD_pred
Homology
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|585102382|gb|EWM21993.1| (nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 369.777 bits (948), Expect = 1.172e-129
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 179
            MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN
Sbjct:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 179          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|585102383|gb|EWM21994.1| (nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 319.316 bits (817), Expect = 4.431e-110
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query:   27 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 179
            MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN
Sbjct:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 153          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|553186865|ref|XP_005854504.1| (nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|422294558|gb|EKU21858.1| nudix hydrolase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 318.161 bits (814), Expect = 1.418e-109
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0
Query:   27 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 179
            MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDE+IRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN
Sbjct:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDEQIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 153          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|568029512|gb|ETM03435.1| (hypothetical protein L917_00357 [Phytophthora parasitica] >gi|570998884|gb|ETP55003.1| hypothetical protein F442_00401 [Phytophthora parasitica P10297])

HSP 1 Score: 162.925 bits (411), Expect = 5.878e-48
Identity = 85/174 (48.85%), Postives = 119/174 (68.39%), Query Frame = 0
Query:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 174
            MSLSA E V IVDE N V+ +  R +MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT++E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MSLSAKEEVCIVDEDNNVIGKADRAVMRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTVDEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|568060153|gb|ETM56693.1| (hypothetical protein L914_00380 [Phytophthora parasitica] >gi|570962076|gb|ETP27055.1| hypothetical protein F441_00405 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 162.54 bits (410), Expect = 6.140e-48
Identity = 86/174 (49.43%), Postives = 118/174 (67.82%), Query Frame = 0
Query:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 174
            MSLSA E V IVDE N V+ +  R +MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+GI  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MSLSAKEEVCIVDEDNNVIGKADRSVMRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGI-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|567972049|gb|ETK97042.1| (hypothetical protein L915_00376 [Phytophthora parasitica] >gi|568000373|gb|ETL50393.1| hypothetical protein L916_00377 [Phytophthora parasitica])

HSP 1 Score: 162.155 bits (409), Expect = 1.083e-47
Identity = 85/174 (48.85%), Postives = 118/174 (67.82%), Query Frame = 0
Query:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 174
            MSLSA E V IVDE N V+ +  R +MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MSLSAKEEVCIVDEDNNVIGKADRSVMRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|675162157|ref|XP_008889963.1| (hypothetical protein PPTG_00335 [Phytophthora parasitica INRA-310] >gi|568109213|gb|ETN23820.1| hypothetical protein PPTG_00335 [Phytophthora parasitica INRA-310])

HSP 1 Score: 161.77 bits (408), Expect = 1.317e-47
Identity = 85/174 (48.85%), Postives = 118/174 (67.82%), Query Frame = 0
Query:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 174
            MSLSA E V IVDE N V+ +  R +MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MSLSAKEEVCIVDEDNNVIGKADRAVMRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|698777240|ref|XP_009821664.1| (hypothetical protein H257_00608 [Aphanomyces astaci] >gi|574123789|gb|ETV89264.1| hypothetical protein H257_00608 [Aphanomyces astaci])

HSP 1 Score: 160.999 bits (406), Expect = 6.275e-47
Identity = 82/166 (49.40%), Postives = 111/166 (66.87%), Query Frame = 0
Query:    2 SLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLD 167
            SL+A E V+IVD  N V+ +  R +MR   L HR+TYI  RNS G++YVQ+RT++KDYCPG+ + +AGGVV AGE+Y +NA RE +EE+G+        + TF YQD    V+G  +E V+DGALTLQ EEV  V  M+  ++  R    D+FTPD L+A R YL+
Sbjct:   21 SLTAREQVEIVDLDNNVVGKADRSVMRVFSLPHRATYIVIRNSAGDFYVQRRTLIKDYCPGFLDPMAGGVVQAGESYEDNALREVKEEMGV-SGVPLTFVCTFFYQDASTVVWGGMFECVYDGALTLQPEEVSQVLVMSASDIIAR---ADEFTPDGLFAMRLYLE 182          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|570338061|gb|ETO86009.1| (hypothetical protein F444_00407 [Phytophthora parasitica P1976])

HSP 1 Score: 159.458 bits (402), Expect = 1.023e-46
Identity = 85/174 (48.85%), Postives = 117/174 (67.24%), Query Frame = 0
Query:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 174
            MSLSA E V IVDE N V+ +  R +MR   L HR++YI  +NS G+YYVQ+RTM+KDYCP   + +AGGVV  GE    NA+REAEEE+GI  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MSLSAKEEVCIVDEDNNVIGKADRSVMRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPEMLDPMAGGVVQYGEPMDVNAEREAEEEMGI-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21993.1 vs. NCBI_GenBank
Match: gi|695439263|ref|XP_009532665.1| (hypothetical protein PHYSODRAFT_317448 [Phytophthora sojae] >gi|348672512|gb|EGZ12332.1| hypothetical protein PHYSODRAFT_317448 [Phytophthora sojae])

HSP 1 Score: 159.458 bits (402), Expect = 1.205e-46
Identity = 83/174 (47.70%), Postives = 117/174 (67.24%), Query Frame = 0
Query:    1 MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 174
            MSLSA E V IVDE N V+ +  R +MR   L HR++YI  +NS G++YVQ+RTM+KDYCPG  + + GGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R +   +FTPD ++A  KYL F+  +G+
Sbjct:    1 MSLSAKEEVCIVDEENNVIGKADRAVMRAFNLPHRASYIVIKNSSGKFYVQRRTMIKDYCPGMLDPMTGGVVQFGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILARRK---EFTPDGIFAFEKYLKFIEAEGK 170          
The following BLAST results are available for this feature:
BLAST of EWM21993.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102382|gb|EWM21993.1|1.172e-129100.00nudix hydrolase [Nannochloropsis gaditana][more]
gi|585102383|gb|EWM21994.1|4.431e-110100.00nudix hydrolase [Nannochloropsis gaditana][more]
gi|553186865|ref|XP_005854504.1|1.418e-10999.35nudix hydrolase [Nannochloropsis gaditana CCMP526]... [more]
gi|568029512|gb|ETM03435.1|5.878e-4848.85hypothetical protein L917_00357 [Phytophthora para... [more]
gi|568060153|gb|ETM56693.1|6.140e-4849.43hypothetical protein L914_00380 [Phytophthora para... [more]
gi|567972049|gb|ETK97042.1|1.083e-4748.85hypothetical protein L915_00376 [Phytophthora para... [more]
gi|675162157|ref|XP_008889963.1|1.317e-4748.85hypothetical protein PPTG_00335 [Phytophthora para... [more]
gi|698777240|ref|XP_009821664.1|6.275e-4749.40hypothetical protein H257_00608 [Aphanomyces astac... [more]
gi|570338061|gb|ETO86009.1|1.023e-4648.85hypothetical protein F444_00407 [Phytophthora para... [more]
gi|695439263|ref|XP_009532665.1|1.205e-4647.70hypothetical protein PHYSODRAFT_317448 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8710rna8710Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications