EWM22294.1, cds8378 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|585102775|gb|EWM22294.1| (hypothetical protein Naga_100933g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 278.87 bits (712), Expect = 6.111e-95 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query: 1 SPAPSFQVTAWWDQHKPAYFKPKPRADGSLPPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKTMPE 139
SPAPSFQVTAWWDQHKPAYFKPKPRADGSLPPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKTMPE
Sbjct: 1 SPAPSFQVTAWWDQHKPAYFKPKPRADGSLPPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKTMPE 139
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|1173926348|gb|OQR80617.1| (hypothetical protein ACHHYP_17415 [Achlya hypogyna]) HSP 1 Score: 82.4185 bits (202), Expect = 5.078e-17 Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 0
Query: 31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
P + +++ +G PFLVWW TL+ ++ G FG DA+ L R G+DK VDL + P GN+ +A+ NE+LE VRFP L T R W +VR +
Sbjct: 69 PGKFMAVIQANGLPFLVWWTTLYGASGFTIYYGLSSGWFGGS-DAVDLIRGLGLDKYVDLESLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 172
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|1173952634|gb|OQS00267.1| (hypothetical protein THRCLA_06079 [Thraustotheca clavata]) HSP 1 Score: 80.4925 bits (197), Expect = 2.270e-16 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query: 31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
P + +++ +G PFLVWW TL+ ++ G FG DA+ L R G+D +DL + P GN+ +A+ NE+LE VRFP L T R W +VR +
Sbjct: 70 PGKFMAMIQANGLPFLVWWTTLYGASGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWTKVRNQ 173
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|669139286|ref|XP_008605211.1| (hypothetical protein SDRG_01464 [Saprolegnia diclina VS20] >gi|530743255|gb|EQC41497.1| hypothetical protein SDRG_01464 [Saprolegnia diclina VS20]) HSP 1 Score: 79.337 bits (194), Expect = 4.649e-16 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query: 31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
P + +++ +G PFLVWW TL+ ++ G FG DA+ L R G+D +DL + P GN+ +A+ NE+LE VRFP L T R W +VR +
Sbjct: 57 PGKFMAVIQANGLPFLVWWTTLYGATGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 160
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|813109019|ref|XP_012194438.1| (hypothetical protein SPRG_00832 [Saprolegnia parasitica CBS 223.65] >gi|641541008|gb|KDO34771.1| hypothetical protein SPRG_00832 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 79.7221 bits (195), Expect = 6.069e-16 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query: 31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
P + +++ +G PFLVWW TL+ ++ G FG DA+ L R G+D +DL + P GN+ +A+ NE+LE VRFP L T R W +VR +
Sbjct: 72 PGKFMAVIQANGLPFLVWWTTLYGATGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 175
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|669171605|ref|XP_008621151.1| (hypothetical protein SDRG_16711 [Saprolegnia diclina VS20] >gi|530727181|gb|EQC25423.1| hypothetical protein SDRG_16711 [Saprolegnia diclina VS20]) HSP 1 Score: 79.7221 bits (195), Expect = 6.069e-16 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query: 31 PPSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGK 135
P + +++ +G PFLVWW TL+ ++ G FG DA+ L R G+D +DL + P GN+ +A+ NE+LE VRFP L T R W +VR +
Sbjct: 72 PGKFMAVIQANGLPFLVWWTTLYGATGFTIYYGLSRGWFGGS-DAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLATTPMIKRAWAKVRNQ 175
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|585102779|gb|EWM22297.1| (hypothetical protein Naga_101653g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 77.7962 bits (190), Expect = 1.147e-14 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 0
Query: 33 SWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTV 122
+W EL + +GP FLV+W +W+L ++ E VD L LARA +D ++DL + PS GN+ VAI NEV+E+VRFP L TV
Sbjct: 143 TWKELFKKYGPAFLVYWNGVWILSGITIYAALEL----GGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLATV 228
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|698784353|ref|XP_009825220.1| (hypothetical protein H257_03022 [Aphanomyces astaci] >gi|574119723|gb|ETV85202.1| hypothetical protein H257_03022 [Aphanomyces astaci]) HSP 1 Score: 69.707 bits (169), Expect = 4.855e-12 Identity = 33/100 (33.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query: 37 LVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKT 136
+V+ +G PF++WW TL+ G++ E G DA+ L ++ G+D+ +D+ + P+ GN+ +A+ NE+LE VR PL + T R + GK
Sbjct: 85 MVQENGLPFVLWWVTLYGSSGVGIYYALEAGYIGGG-DAIHLIQSLGLDQYIDIEKLNPTYGNIAIAVLMNEILEAVRLPLCIATTPLIKRAFLSATGKN 183
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|673027428|ref|XP_008867675.1| (hypothetical protein H310_04908 [Aphanomyces invadans] >gi|574476448|gb|ETW03446.1| hypothetical protein H310_04908 [Aphanomyces invadans]) HSP 1 Score: 69.3218 bits (168), Expect = 4.978e-12 Identity = 33/100 (33.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query: 37 LVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKPWTRWWYRVRGKT 136
+V+ +G PF+VWW TL+ G++ E G DA+ + ++ G+D+ +D + P+ GN+ +A+ NE+LE VR PL + T R + GK+
Sbjct: 81 MVQENGLPFVVWWVTLYGSCGVGIYYALEAGYIGGG-DAIHMIQSLGLDQYIDTEKLNPTYGNIAIAVLLNEILETVRLPLCIATTPMIKRAYLNATGKS 179
BLAST of EWM22294.1 vs. NCBI_GenBank
Match: gi|1072222731|gb|OEU07490.1| (hypothetical protein FRACYDRAFT_250908 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 65.0846 bits (157), Expect = 1.590e-10 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0
Query: 42 GPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTVKP 124
G PFL WW +WV+ G++ G E LFG DV + L + +D S V P GN+ A+A NE++E +RFP LLT KP
Sbjct: 64 GMPFLAWWTGVWVVTGVGIYSGME--LFGIDVLGM-LQTTLPSNNYIDFSKVDPKTGNVMTAVAINELIEPIRFPFVLLTAKP 143 The following BLAST results are available for this feature:
BLAST of EWM22294.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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