EWM23876.1, cds6797 (CDS) Nannochloropsis gaditana

Overview
NameEWM23876.1
Unique Namecds6797
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:563383..563946 -

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Properties
Property NameValue
Protein idEWM23876.1
Productprotein phosphatase
Orig transcript idgnl|cribi|Naga_101082g2.4085.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:563383..563946 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR001932PPM-type_phosphatase_dom
Homology
[Close]
BLAST of EWM23876.1 vs. NCBI_GenBank
Match: gi|585105154|gb|EWM23876.1| (protein phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 380.563 bits (976), Expect = 1.212e-133
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 
Query:    1 MGARKSRHGSCLSALSTSFSCSSSPPRLWSPPLPLLLLFILLILSHNHPVDSFSWPNPLASFSQKNRECVRSVRAVAFSTCSYPANNPIEDRYIVVDDQIPSLFASASSSSLPYFHAAVFDGHGGAEVAEMVRNTLVGKVKETIAKLPRHAQKDETVVRARRRAQNALRERVIVAPVWYSVSSKVGP 187
            MGARKSRHGSCLSALSTSFSCSSSPPRLWSPPLPLLLLFILLILSHNHPVDSFSWPNPLASFSQKNRECVRSVRAVAFSTCSYPANNPIEDRYIVVDDQIPSLFASASSSSLPYFHAAVFDGHGGAEVAEMVRNTLVGKVKETIAKLPRHAQKDETVVRARRRAQNALRERVIVAPVWYSVSSKVGP
Sbjct:    1 MGARKSRHGSCLSALSTSFSCSSSPPRLWSPPLPLLLLFILLILSHNHPVDSFSWPNPLASFSQKNRECVRSVRAVAFSTCSYPANNPIEDRYIVVDDQIPSLFASASSSSLPYFHAAVFDGHGGAEVAEMVRNTLVGKVKETIAKLPRHAQKDETVVRARRRAQNALRERVIVAPVWYSVSSKVGP 187
[Close]
BLAST of EWM23876.1 vs. NCBI_GenBank
Match: gi|553189860|ref|XP_005855088.1| (protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526] >gi|422293972|gb|EKU21272.1| protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 325.865 bits (834), Expect = 1.253e-110
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 MGARKSRHGSCLSALSTSFSCSSSPPRLWSPPLPLLLLFILLILSHNHPVDSFSWPNPLASFSQKNRECVRSVRAVAFSTCSYPANNPIEDRYIVVDDQIPSLFASASSSSLPYFHAAVFDGHGGAEVAEMVRNTLVGKVKETIAKLPRHAQKDETVV 158
            MGARKSRHGSCLSALSTSFSCSSSPPRLWSPPLPLLLLFILLILSHNHPVDSFSWPNPLASFSQKNRECVRSVRAVAFSTCSYPANNPIEDRYIVVDDQIPSLFASASSSSLPYFHAAVFDGHGGAEVAEMVRNTLVGKVKETIAKLPRHAQKDETV+
Sbjct:    1 MGARKSRHGSCLSALSTSFSCSSSPPRLWSPPLPLLLLFILLILSHNHPVDSFSWPNPLASFSQKNRECVRSVRAVAFSTCSYPANNPIEDRYIVVDDQIPSLFASASSSSLPYFHAAVFDGHGGAEVAEMVRNTLVGKVKETIAKLPRHAQKDETVI 158
The following BLAST results are available for this feature:
BLAST of EWM23876.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105154|gb|EWM23876.1|1.212e-133100.00protein phosphatase [Nannochloropsis gaditana][more]
gi|553189860|ref|XP_005855088.1|1.253e-11099.37protein phosphatase 2c, partial [Nannochloropsis g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6813rna6813Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications