EWM24542.1, cds6126 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|585106051|gb|EWM24542.1| (serine threonine-protein kinase nek1 [Nannochloropsis gaditana]) HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MDKDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECHENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRAQELSKQILIPASAPKIDITR 289 MDKDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECHENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRAQELSKQILIPASAPKIDITR Sbjct: 1 MDKDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECHENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRAQELSKQILIPASAPKIDITR 289
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|299117266|emb|CBN75228.1| (Serine/threonine protein kinase, possibly NIMA-like [Ectocarpus siliculosus]) HSP 1 Score: 228.794 bits (582), Expect = 3.150e-65 Identity = 115/274 (41.97%), Postives = 173/274 (63.14%), Query Frame = 0 Query: 3 KDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALK----ECHENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRAQEL 272 ++Y I +LGEG+FG+VYLM+H T+ LVC K +K E EV+++ ++CHP IV Y +SF N + I+M+Y D GDL +++ A+ PES++ WF Q L L +MHS +++HRDIK N+F+L R+VLGD+G++K L T+ FA T IGTP+YM+PEIF N +N K+DVW+LG LLYEL L HAF S++ +A ++ G F P + +YS + L+ ++L +P +RP + ++LR K+F+ R +E Sbjct: 2 EEYEPIKVLGEGSFGKVYLMKHSKTRDLVCTKVIKLKNIPPKEQEACKNEVELLSRMCHPNIVGYTNSFLYKNCLCIIMEYCDAGDLGDRVNEAKG----QLLPESKVMTWFVQTALGLHFMHSNRVLHRDIKTQNVFILS-SGRVVLGDLGISKLLGGTRDFASTCIGTPYYMSPEIFKNHPYNDKSDVWALGCLLYELLTLKHAFDAQSLNGLAGKIIKGKF----PSVSTQYSKNLRALVNDMLATNPKKRPDIEQILR-KSFVQTRVKEF 265
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|299473003|emb|CBN77404.1| (Serine/threonine protein kinase [Ectocarpus siliculosus]) HSP 1 Score: 225.328 bits (573), Expect = 3.876e-63 Identity = 124/269 (46.10%), Postives = 177/269 (65.80%), Query Frame = 0 Query: 1 MDKDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECHENSIPWKE-------VKIMRKLCHPCIVRYQDSF--SLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLR 260 M+K Y I +LG G+FG+VYLMRH +RLVC K +K +IP KE V +MR+L HP IV Y+DSF + + IVM+Y D GDLS+++ AR+ R+ FPES+I WF Q+ L L YMHSR ++HRD+K N+FLLG RLVLGD+G++K L+ T FA T IGTP+YM+PE+F N+ +N K+D+W+LG +LYE++ L+HAF S+ +A+ V G + P +YS + DLI +L P++RP + ++L+ Sbjct: 1 MEK-YERIKVLGVGSFGKVYLMRHRQQRRLVCAKIIKI---KNIPRKEREACRTEVDLMRRLHHPNIVGYKDSFLTPRKDHLCIVMEYCDGGDLSTQIKNARK---RL-FPESKILHWFVQIALGLHYMHSRLVLHRDLKTQNIFLLG-NGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPELFNNKPYNHKSDIWALGCVLYEMSALSHAFDATSLHGLAQRVAKGRY----PSIHVKYSRNLRDLISRMLATSPSQRPDLDQILQ 256
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|1160121646|ref|XP_020387202.1| (serine/threonine-protein kinase Nek5 [Rhincodon typus]) HSP 1 Score: 217.624 bits (553), Expect = 1.629e-61 Identity = 113/272 (41.54%), Postives = 163/272 (59.93%), Query Frame = 0 Query: 1 MDKDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECH----ENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARR 268 MDK Y I LLGEGAFG+ +L++ + V VK +K E KEV +M K+ HP IV+Y DSF +FIVM+Y D GDL +++ ++F E Q+ WF Q+CL L+++H RK++HRDIK N+FL + LGD G+A+ L+ T AHT IGTP+Y++PEI N+ +N K D+WSLG +LYELA L H F G ++ ++ + G + PV RY+ + L+ +L V+P RPS+ +L+ K FL +R Sbjct: 1 MDK-YEVIKLLGEGAFGKAFLVKAKDNNKHVVVKEIKTAKVHQKEREAALKEVTLMDKMKHPNIVKYLDSFEEGQSLFIVMEYCDGGDLMHRINMQHG----VYFTEEQVLDWFVQICLGLKHIHDRKILHRDIKTQNIFLCNKGVTVKLGDFGIARMLNNTMELAHTRIGTPYYLSPEICANQPYNNKTDIWSLGCVLYELATLNHPFEGNNLHQLVVRICRGRYAPV----NSRYTYDLKMLLAQLFKVNPRDRPSINSILKRK-FLEKR 262
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|260806851|ref|XP_002598297.1| (hypothetical protein BRAFLDRAFT_204870 [Branchiostoma floridae] >gi|229283569|gb|EEN54309.1| hypothetical protein BRAFLDRAFT_204870, partial [Branchiostoma floridae]) HSP 1 Score: 202.601 bits (514), Expect = 1.216e-60 Identity = 102/275 (37.09%), Postives = 166/275 (60.36%), Query Frame = 0 Query: 5 YRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALK----ECHENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRAQELSKQ 275 Y+ + +GEG+FG+ L+R+ + +K + E +EV ++ K+ H IV YQ+SF ++IVM + D GDL +++A R + F E Q+ WF QLCLAL+++H RK++HRDIK N+FL+ + + LGD G+A+ L+ T A T IGTP+Y++PE+ NR +N K+D+W+LG +LYE+ L HAF ++ + ++ G + PV+P RYS + +L+ +L +P RPS+ +LR KNF+++R ++ Q Sbjct: 4 YQKLKRIGEGSFGKALLVRNKKDGKQYVIKEISITKMSPKERQEARREVTVLSKMKHTNIVSYQESFEEIGNLYIVMDFCDGGDLYQRINAQRG----ILFQEDQVMNWFVQLCLALKHVHDRKILHRDIKSQNIFLM-RDGAIKLGDFGIARVLNNTMELARTCIGTPYYLSPEMCENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSP----RYSYELRNLVAQLFKRNPRDRPSINSILR-KNFISKRIEKFLSQ 268
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|156408481|ref|XP_001641885.1| (predicted protein [Nematostella vectensis] >gi|156229025|gb|EDO49822.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 200.675 bits (509), Expect = 1.066e-59 Identity = 106/277 (38.27%), Postives = 166/277 (59.93%), Query Frame = 0 Query: 5 YRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECH----ENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRAQE-LSKQI 276 Y + +GEG+FG+ L++ + +K + C E KEVK++ +L HP IV YQ+SF + ++IVM Y D GDL K++ R + F E Q+ WF Q+CL L+++H RK++HRDIK N+FL + +GD G+A+ L +T A T IGTP+Y++PEI NR +N K+D+WSLG +LYE+ L HAF ++ + ++ G + P+ RYS+ + L+ +LL +P RPSV +L+ KNF+ +R ++ LSK++ Sbjct: 4 YVRVKKIGEGSFGKALLVKKRNDGKHYVIKEINICRMKPREREESRKEVKVLSQLKHPNIVSYQESFEESGNLYIVMDYCDGGDLYKKINGQRG----IAFSEDQVMDWFVQICLGLKHVHDRKILHRDIKSQNIFLT-RHGIIKMGDFGIARVLHSTVELARTCIGTPYYLSPEIVENRPYNNKSDIWSLGCVLYEMLTLKHAFEAGNMKNLVLKIIRGSYPPIP----LRYSADIRMLVAQLLKRNPHDRPSVNTVLK-KNFIQKRIEKFLSKEV 270
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|123487738|ref|XP_001325013.1| (AGC family protein kinase [Trichomonas vaginalis G3] >gi|121907905|gb|EAY12790.1| AGC family protein kinase [Trichomonas vaginalis G3]) HSP 1 Score: 204.527 bits (519), Expect = 4.015e-59 Identity = 104/261 (39.85%), Postives = 157/261 (60.15%), Query Frame = 0 Query: 3 KDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECHENSI----PWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEML 259 +DY I +GEG+FG+ L++H+ +Q L +K + +N +E ++ +L HP I+R+ DSF +++ VM+YA GD++SK+ A+ MHFPE I WF+Q+CL LQY+HS ++HRDIK N+FL + + +GD G AK L+ T FA T +G+PFY++PEI +N K D+WSLG +LYEL L AF G I I +L P+ E YSS + +L+ +L +P RRP++T++L Sbjct: 2 QDYEVIKCIGEGSFGKALLVKHIESQELRVIKQVDLSQQNETIQEASLRESNLLSELDHPNIIRFYDSFLEGDVLCTVMEYAAGGDIASKIAEAKG----MHFPEFVIISWFAQMCLGLQYIHSHHILHRDIKSQNIFL-DADGNVKIGDFGTAKCLEETGEFAETVVGSPFYLSPEICQGVPYNAKTDIWSLGCVLYELCTLVPAFSGDCIGGIVMKILRSEQPPIPGE----YSSDLSNLVDSMLQKNPCRRPTITQIL 253
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|471226639|ref|XP_004032351.1| (protein kinase domain protein [Ichthyophthirius multifiliis] >gi|340504309|gb|EGR30764.1| protein kinase domain protein [Ichthyophthirius multifiliis]) HSP 1 Score: 207.994 bits (528), Expect = 6.082e-59 Identity = 107/270 (39.63%), Postives = 171/270 (63.33%), Query Frame = 0 Query: 5 YRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKE---CHEN-SIPWKEVKIMRKLCHPCIVRYQDSF-SLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRA 269 Y +I L+G GAFGQVY++RH+ +L +K +K C ++ EV++++KL H IV Y+DS+ + IVM + + GD+ +K+ +++ HFPE+QI W +Q+ LAL Y+H +K++HRD+K N+FL R+ LGD G+AK LD+T+ FA+T IGTP+YM+PE+F + ++ K+DVW+ G +LYE+ L HAF S++ +A ++ G + P+ YS + DLI ++L + P RPS+ E+L K F+ +R Sbjct: 4 YETIKLIGSGAFGQVYMVRHMREDKLYVIKKIKTRDMCQKDRENTENEVRLLQKLRHSNIVAYKDSYMDREQYLNIVMIHCEGGDMHNKI----QNQKGKHFPENQILDWLAQMALALYYLHDKKILHRDLKTQNIFL--KHGRVRLGDFGIAKVLDSTRDFANTCIGTPYYMSPELFKYKPYSYKSDVWAFGCVLYEMCNLRHAFDAQSLNGLAVKIMKGSYPPI----NSSYSWGLRDLIGKMLQLVPNNRPSIIEIL-NKPFVKKRV 262
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|443701746|gb|ELU00045.1| (hypothetical protein CAPTEDRAFT_106738 [Capitella teleta]) HSP 1 Score: 197.978 bits (502), Expect = 1.192e-58 Identity = 105/280 (37.50%), Postives = 161/280 (57.50%), Query Frame = 0 Query: 3 KDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALK----ECHENSIPWKEVKIMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEMLRGKNFLARRAQELSKQILI 278 + Y I +GEG+FG+ L+R + + VK + + E KEV ++ +L HP +V Y++SF ++IVM Y D GDL +++A R + FPE QI WF Q CLA++++H RK++HRD+K N+FL + LGD G++K L++T A T IGTP+Y++PEI N+ +N K+DVWSLG +LYEL L HAF ++ + ++ G + PV P RY+ + LI L P RPS+ +LR +R + LS+ + + Sbjct: 2 EKYVRIKKIGEGSFGKALLVRSKENGKQMVVKEINMSRMQRKEREESRKEVAVLAQLAHPNVVAYKESFEEVGNLYIVMDYCDGGDLYGRINAQRG----ILFPEDQILDWFVQTCLAIKHIHDRKILHRDVKSQNIFLT-KHGIIKLGDFGISKVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDVWSLGCVLYELCTLKHAFEAGNMKNLVLKIIRGSYPPVPP----RYTYELRSLIATLFKRSPRDRPSINSVLRKSILQSRIKKFLSESVSV 272
BLAST of EWM24542.1 vs. NCBI_GenBank
Match: gi|145552322|ref|XP_001461837.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124429673|emb|CAK94464.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 207.994 bits (528), Expect = 1.754e-58 Identity = 107/262 (40.84%), Postives = 164/262 (62.60%), Query Frame = 0 Query: 5 YRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALK------ECHENSIPWKEVKIMRKLCHPCIVRYQDSF-SLANIVFIVMQYADKGDLSSKLDAARRSRPRMHFPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVGVAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAYLTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPTRRPSVTEML 259 Y + +G G+FGQVYL R+ RL +K +K + EN+ EV++++KL HP IV Y+DS+ + IVM + + GD+ K+ R + FPESQI WF+Q+ LAL Y+H +K++HRD+K N+FL R+ LGD G+AK LD+T+ A+T IGTP+YM+PE+F + ++ K+DVW+LG LYE+ L HAF S++ +A +L G + ++P YS A+ DLI ++LN +P RP++ E++ Sbjct: 4 YEIVKSIGSGSFGQVYLARNKREDRLYVIKRIKIRDMNQKDRENT--ENEVRLLQKLRHPNIVAYKDSYLDREQYLNIVMIHCEGGDIYQKI------RNKKSFPESQILDWFAQMTLALCYLHEQKILHRDLKTQNIFLKNG--RVRLGDFGIAKVLDSTRDLANTCIGTPYYMSPELFKYKPYSYKSDVWALGCCLYEMCNLRHAFDAQSMNGLALKILKGSYSSISPT----YSKALRDLINKMLNTNPKARPTIQEIV 251 The following BLAST results are available for this feature:
BLAST of EWM24542.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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