EWM24996.1, cds5677 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24996.1 vs. NCBI_GenBank
Match: gi|585106631|gb|EWM24996.1| (hypothetical protein Naga_100068g30, partial [Nannochloropsis gaditana]) HSP 1 Score: 248.825 bits (634), Expect = 1.368e-83 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query: 1 MGRRWASKQKPSSQLLSLLGLIFCAQLYIIFHSSSSSSCAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSKKRIL 123
MGRRWASKQKPSSQLLSLLGLIFCAQLYIIFHSSSSSSCAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSKKRIL
Sbjct: 1 MGRRWASKQKPSSQLLSLLGLIFCAQLYIIFHSSSSSSCAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSKKRIL 123
BLAST of EWM24996.1 vs. NCBI_GenBank
Match: gi|585106628|gb|EWM24994.1| (hypothetical protein Naga_101727g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 181.8 bits (460), Expect = 9.001e-57 Identity = 112/123 (91.06%), Postives = 112/123 (91.06%), Query Frame = 0
Query: 2 GRRWASKQKPSSQLLSLLGLIFCAQLYIIFHSSSSSSCAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEK----DVTGSKK 120
RRW SKQKPSSQLL LLGLIFCAQLYIIFHSSSSS CAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVD NSVSGWEK DV G KK
Sbjct: 24 ARRWTSKQKPSSQLLLLLGLIFCAQLYIIFHSSSSS-CAGKEQHAIPTPASLAASPSSSPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDSNSVSGWEKNPIQDVAGKKK 145
BLAST of EWM24996.1 vs. NCBI_GenBank
Match: gi|585106121|gb|EWM24604.1| (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana]) HSP 1 Score: 80.1073 bits (196), Expect = 4.958e-15 Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query: 60 SPTVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSK 119
+ T+P E P LP PL VACL++ RTVSTTA+NL R+LMERVD NS+SGWE DV GS+
Sbjct: 86 NETLPYEPPRLP---SPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSR 142 The following BLAST results are available for this feature:
BLAST of EWM24996.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|