EWM26618.1, cds4030 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|585108706|gb|EWM26618.1| (arginine-trna-protein transferase 1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
Query: 1 MPTSSPCVLASLFIVLLLLYPPSGCVCFRLGKRENDVASINSDGASTAPAQVQQWKVPRLSKVVAEAMGHGGDSATSVECHTADKLMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERIDGGMA 324
MPTSSPCVLASLFIVLLLLYPPSGCVCFRLGKRENDVASINSDGASTAPAQVQQWKVPRLSKVVAEAMGHGGDSATSVECHTADKLMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERIDGGMA
Sbjct: 1 MPTSSPCVLASLFIVLLLLYPPSGCVCFRLGKRENDVASINSDGASTAPAQVQQWKVPRLSKVVAEAMGHGGDSATSVECHTADKLMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERIDGGMA 324
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|553186572|ref|XP_005854443.1| (hypothetical protein NGA_0014302 [Nannochloropsis gaditana CCMP526] >gi|422294609|gb|EKU21909.1| hypothetical protein NGA_0014302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 322/324 (99.38%), Postives = 322/324 (99.38%), Query Frame = 0
Query: 1 MPTSSPCVLASLFIVLLLLYPPSGCVCFRLGKRENDVASINSDGASTAPAQVQQWKVPRLSKVVAEAMGHGGDSATSVECHTADKLMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERIDGGMA 324
MPTSSPCVLASLFIVLLLLYPPSGCVCFRLGKRE DVASINSDGASTAPAQVQQWKVPRLSKVVAEAMGHGGDSATSVECHTADKLMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKT AFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERIDGGMA
Sbjct: 1 MPTSSPCVLASLFIVLLLLYPPSGCVCFRLGKREKDVASINSDGASTAPAQVQQWKVPRLSKVVAEAMGHGGDSATSVECHTADKLMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTCAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERIDGGMA 324
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|551551947|ref|XP_005763395.1| (hypothetical protein EMIHUDRAFT_105039 [Emiliania huxleyi CCMP1516] >gi|485612723|gb|EOD10966.1| hypothetical protein EMIHUDRAFT_105039 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 137.117 bits (344), Expect = 1.781e-34 Identity = 79/251 (31.47%), Postives = 135/251 (53.78%), Query Frame = 0
Query: 70 HGGDSATSVECHTADKLMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDV-ESVAATEVDVAEFFRRESRRSLEMTKERI 319
G +A + A +LM++RG N KAA+ + L + P +A++K + ADA + R TNAN+++I+G DS +K+W+T EA + + P + + + +A+ + +S+KGI+K A+TG G ++ L ++ + HP +D V F G F APWP+ KA + + P + RN +++GV + AG + A F+RA+ V ++TE D+A+F +RR L+ +E I
Sbjct: 57 QAGGAAADPQRKQAGELMKKRGVANAEKAASLLRESLRRDPENAAIKLELADALNMVTRIKTNANSLVIEGTQDSPAFKKIWRTLGGEALPLALDARKAFPGSVKALSVYADAFMFSSSAKGIVKQALTGVGKKYVALAKELYA-HPEWDGAVGCAFLGGFYAVAPWPIGSKGKAAKYLDEGARRAP-TRRNLYYVGVVSYQAGDYRKAADHFQRAIATPVSREPSSTEADIADFLLERARRGLKAAQEAI 305
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|1129193422|gb|OLP98033.1| (hypothetical protein AK812_SmicGene19561 [Symbiodinium microadriaticum]) HSP 1 Score: 132.494 bits (332), Expect = 5.831e-33 Identity = 80/269 (29.74%), Postives = 138/269 (51.30%), Query Frame = 0
Query: 63 VVAEAMGHGGDSATSV-------ECHTADKLMQE--RGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERIDGG 322
V+A + GD T V E A K M + R +A ++ +E +P A L+ + ADA ++R TN N +LI G DS+ N K+WK EA+D A P+N + + +A+ Y +S+ GIL+ A+TG G F+R ++ + P + G+ FIF G F +AAPWPLRD+ +A+ A + + RN +++G++++H ++E A F ++ D + +E D A +E++ +++ + + G
Sbjct: 14 VLAWCISQQGDPTTMVASPPLQKELEKARKTMAKAPRSVSECEASAGTFRAAVESRPEDALLRLQLADALNCVMRIKTNGNMLLISGTQDSQSNIKVWKEVGPEAWDNANRALAALPKNPQAASVYADAFQYMSSAHGILRQALTGGGREFLRNAQRMQAVGPDEEGGLGFIFEGCFYIAAPWPLRDLKRALGLMRRAL-AQKKCKRNYYYVGLANYHLQNYEEAIDYFAKSA--DAKPEFLSEFDFAAGLTQEAQHGIKLATDALRAG 279
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|922853448|gb|KOO22063.1| (mog1p -like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 129.028 bits (323), Expect = 8.074e-31 Identity = 71/234 (30.34%), Postives = 128/234 (54.70%), Query Frame = 0
Query: 86 LMQERGPDNYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLEMTKERI 319
LM++RG D KA + L+K+P + + ADA +++R TNANA++IDG D+ N+++WK+ EA + K+ + P + + + +++ + S+KGI+K A++G + R+ +++ ++P +D V +F G APWP+ + A + A + P + RN +++GV+ F G F+ A + FE+A+ S ATE+D F ES+ L K+ +
Sbjct: 147 LMKQRGLDKCEKAVGLLRSALKKEPGNIETAMELADALNAVMRIKTNANALVIDGSLDTPANKRVWKSLGDEALPLAKKAYEARPGDVKALAVYADSFMFSCSAKGIVKQALSGTAKEYKRVANEL-RKYPKWDGAVGLVFLGGLYNVAPWPVGNKQLAKKLLGEAASIAP-TRRNLYYVGVNAFQLGEFQKAAKYFEKALKAPCGS--ATEMDFGGFLLAESKTGLARAKQAL 376
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|1084769294|gb|OGQ09481.1| (hypothetical protein A2138_15530 [Deltaproteobacteria bacterium RBG_16_71_12]) HSP 1 Score: 122.094 bits (305), Expect = 5.876e-29 Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 0
Query: 94 NYRKAAAEYKLLLEKQPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLE 313
++ +A A + L K+P L K + +++R+ T N L++G SD+ N+++W ++D+ + P++ + EAY Y +SS GI++A ++G + + D I++ D V I+ GAF + APWP+ DV KA E F A V PRS+RN +++G+ + G F A + F +D +E+D + +++ L+
Sbjct: 57 SFERAVAIFDAELAKKPGDLDLSLKLCTSLNAVMRAKTQGNLALVNGTSDTPANKRIWGELGKRSHDLCTAVQKARPKDLETALQTAEAYMYLSSSMGIIQAVMSGAANQYKKNADVILALDKRADDDVGDIYHGAFYIVAPWPMNDVKKAREHFAKAAAVAPRSVRNRYYVGLGAYKDGDFATAEREF--VFARDNPCTTKSEIDFCSAIKAQAKLGLD 274
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|922887634|gb|KOO53173.1| (3-hydroxyisobutyryl- hydrolase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 117.087 bits (292), Expect = 1.044e-25 Identity = 74/229 (32.31%), Postives = 117/229 (51.09%), Query Frame = 0
Query: 86 LMQERGPDNYRKAAAEYKLLLEK-QPNSASLKFKFADASVSLLRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAVGKDVESVAATEVDVAEFFRRESRRSLE 313
L Q R + +AA+ + LL K + L A A +++R TN+N + I + D+ EN+ +W++ A ++ PQ+ V +AY + S KG+L AAVTG GL F +++ R P D GV + GAF L APWPL + +A E +A + P S RN++++GV H+ G A + F +A+ S A+E D F RE++ +L+
Sbjct: 284 LRQGRSRADCERAASLLEGLLAKGEDGDGRLSLACAKALNAIMRIRTNSNTLHITRLLDTPENKAVWRSLGPRALELATRAKKARPQDPEALVAYADAYFFANSVKGVLAAAVTGSGLEFKGNSKELIRRCPRADGGVGHCYLGAFFLMAPWPLCNPKRAEEHLSTAHRIVP-SRRNSYYMGVLHYRLGRPAEAERYFRQALSAKCAS--ASEADFGGFMLREAKAALD 509
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|922864774|gb|KOO31959.1| (hypothetical protein Ctob_015312 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 88.9669 bits (219), Expect = 1.464e-17 Identity = 46/150 (30.67%), Postives = 82/150 (54.67%), Query Frame = 0
Query: 127 LRSLTNANAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARI---HVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAG 273
+R+ N +L++G D+ +N+K W + A + + A++P V+ +A+ Y+T+S GI++ A+TG G+ F +L D+ + P++D GV + + F APWPL D +A+ E A RS RNN+++ + + AG
Sbjct: 1 MRTHGKGNILLVEGTLDTADNKKFWGQHGPRALSLARAALAEDPDLISYDLARVIELDAFMYKTASTGIVRNALTGAGVEFKKLADEFTATFPSFDGGVGYTYLAGFYHVAPWPLGDKKRALVEAERAVATSGRSKRNNYYVCLFKYVAG 150
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|585108816|gb|EWM26728.1| (arginine-trna-protein transferase 1 [Nannochloropsis gaditana]) HSP 1 Score: 84.3445 bits (207), Expect = 1.313e-14 Identity = 59/192 (30.73%), Postives = 95/192 (49.48%), Query Frame = 0
Query: 107 EKQPNSASLK-------FKFADASVSLLRSLTNANAV-LIDGVSD--SKENRKLWKTYAFEAYDILKEL--HAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGLTFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFERAV 286
EK S++LK + A+A + +R TN + DG S S E R + Y E I+ L H ++AR+ + TEA +Y S+ ++KAA + +D ++++ P G PFI +G L AP P+R V KA E F++A +++ S RNN+F GV+ + + A + F A+
Sbjct: 145 EKHKFSSALKELEHHVQLEVAEALIFNIRKHTNGGMLPSADGSSPKLSAEQRDVVIEYIPEVLQIMDRLEEHGHHHRDARVSLYATEALSYEVSTTSLVKAAPLLA--RIFKNIDLMLAKSPELKGGAPFIIKGMMFLNAPMPVRSVRKAKECFQTAHQIDASSPRNNYFCGVAAYLEKDYARAHKYFAEAL 334
BLAST of EWM26618.1 vs. NCBI_GenBank
Match: gi|337260239|gb|AEI66399.1| (hypothetical protein LILAB_22520 [Myxococcus fulvus HW-1]) HSP 1 Score: 64.6994 bits (156), Expect = 1.819e-8 Identity = 41/153 (26.80%), Postives = 67/153 (43.79%), Query Frame = 0
Query: 134 NAVLIDGVSDSKENRKLWKTYAFEAYDILKELHAQEPQNARIHVLMTEAYTYRTSSKGILKAAVTGDGL--TFMRLVDQIVSRHPTYDAGVPFIFRGAFLLAAPWPLRDVPKAVEAFESAWEVEPRSLRNNFFLGVSHFHAGSFEAARQAFER 284
A ++ +D N KL K + +D + P H + + G++KA G+GL F +D+ + P YD G P + +G + PWP RD+ K+ +E A P+ LR +FL + G E AR+A ++
Sbjct: 57 KARILQWQADGAANEKLKKVLGRQTWDWGDKAVKLNPARVEGHYYAAAGIGAYSQAVGVMKA--LGEGLEGKFNERLDKAIQIDPDYDRGAPLLAKGRYHYELPWPKRDLAKSASLYEKASAKHPQMLRAYYFLAETLLKDGKPEKAREAIQK 207 The following BLAST results are available for this feature:
BLAST of EWM26618.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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