EWM29247.1, cds1426 (CDS) Nannochloropsis gaditana

Overview
NameEWM29247.1
Unique Namecds1426
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:611937..612372 -
Alignment locationCM002457.1:611614..611812 -
Alignment locationCM002457.1:611355..611476 -
Alignment locationCM002457.1:610854..610938 -
Alignment locationCM002457.1:610627..610756 -
Alignment locationCM002457.1:610402..610493 -
Alignment locationCM002457.1:610187..610357 -
Alignment locationCM002457.1:610007..610134 -
Alignment locationCM002457.1:609721..609778 -
Alignment locationCM002457.1:609496..609521 -
Alignment locationCM002457.1:609384..609445 -
Alignment locationCM002457.1:609075..609293 -
Alignment locationCM002457.1:608827..608979 -
Alignment locationCM002457.1:608648..608729 -
Alignment locationCM002457.1:608472..608574 -
Alignment locationCM002457.1:608207..608377 -
Alignment locationCM002457.1:607943..608072 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29247.1
Productproliferation-associated protein 2g4
Orig transcript idgnl|cribi|Naga_100119g4.8005.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:611937..612372 -
CM002457.1supercontigCM002457.1:611614..611812 -
CM002457.1supercontigCM002457.1:611355..611476 -
CM002457.1supercontigCM002457.1:610854..610938 -
CM002457.1supercontigCM002457.1:610627..610756 -
CM002457.1supercontigCM002457.1:610402..610493 -
CM002457.1supercontigCM002457.1:610187..610357 -
CM002457.1supercontigCM002457.1:610007..610134 -
CM002457.1supercontigCM002457.1:609721..609778 -
CM002457.1supercontigCM002457.1:609496..609521 -
CM002457.1supercontigCM002457.1:609384..609445 -
CM002457.1supercontigCM002457.1:609075..609293 -
CM002457.1supercontigCM002457.1:608827..608979 -
CM002457.1supercontigCM002457.1:608648..608729 -
CM002457.1supercontigCM002457.1:608472..608574 -
CM002457.1supercontigCM002457.1:608207..608377 -
CM002457.1supercontigCM002457.1:607943..608072 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0030170pyridoxal phosphate binding
GO:0030151molybdenum ion binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011037Pyrv_Knase-like_insert_dom
IPR005302MoCF_Sase_C
IPR011991WHTH_DNA-bd_dom
IPR005303MOSC_N
IPR000994Pept_M24_structural-domain
Homology
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|585111769|gb|EWM29247.1| (proliferation-associated protein 2g4 [Nannochloropsis gaditana])

HSP 1 Score: 1626.68 bits (4211), Expect = 0.000e+0
Identity = 788/788 (100.00%), Postives = 788/788 (100.00%), Query Frame = 0
Query:    1 MSSSESGDDLDVKKALGEEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQSNSSDILKDKPKEEEEEEGQGGYGCYGYVKAQESLAHLEIKRGHRSLSSDDNGNNSFELNSIAYRDQGQRNTETTKCACSFEDDLGARYARIEEMRMQKRRRCSSPPPASDASRTSRTPAGAGLEAAATGGIIYVAYKGNSRIVWKYKQGEEAGRVVSLHIYPVKSCRGIDVEASLVEARGLVMDRLWMVVTSTGAFRSQRQLPKMALIQPNLPSSFSAPLEMNAPGMPTCVVPVKTSGKRMSVRVWGDTCQGYDQGDDIAGWLTKFLEEEGLRLVRIDEKERRQVDLAFATRGAITGFADGFPFLMTNQASLDDLNSRLASPLPMARFRPNIVVSGPPAFAEDGWGKIKIGDLRLRVVKPCSRCKVPNTDIETAEVGVEPGNTLKTFRTGALLGIDIGGKNEVYFGQNLLHDSPKKASFLSVGDPLTIFV 788
            MSSSESGDDLDVKKALGEEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQSNSSDILKDKPKEEEEEEGQGGYGCYGYVKAQESLAHLEIKRGHRSLSSDDNGNNSFELNSIAYRDQGQRNTETTKCACSFEDDLGARYARIEEMRMQKRRRCSSPPPASDASRTSRTPAGAGLEAAATGGIIYVAYKGNSRIVWKYKQGEEAGRVVSLHIYPVKSCRGIDVEASLVEARGLVMDRLWMVVTSTGAFRSQRQLPKMALIQPNLPSSFSAPLEMNAPGMPTCVVPVKTSGKRMSVRVWGDTCQGYDQGDDIAGWLTKFLEEEGLRLVRIDEKERRQVDLAFATRGAITGFADGFPFLMTNQASLDDLNSRLASPLPMARFRPNIVVSGPPAFAEDGWGKIKIGDLRLRVVKPCSRCKVPNTDIETAEVGVEPGNTLKTFRTGALLGIDIGGKNEVYFGQNLLHDSPKKASFLSVGDPLTIFV
Sbjct:    1 MSSSESGDDLDVKKALGEEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQSNSSDILKDKPKEEEEEEGQGGYGCYGYVKAQESLAHLEIKRGHRSLSSDDNGNNSFELNSIAYRDQGQRNTETTKCACSFEDDLGARYARIEEMRMQKRRRCSSPPPASDASRTSRTPAGAGLEAAATGGIIYVAYKGNSRIVWKYKQGEEAGRVVSLHIYPVKSCRGIDVEASLVEARGLVMDRLWMVVTSTGAFRSQRQLPKMALIQPNLPSSFSAPLEMNAPGMPTCVVPVKTSGKRMSVRVWGDTCQGYDQGDDIAGWLTKFLEEEGLRLVRIDEKERRQVDLAFATRGAITGFADGFPFLMTNQASLDDLNSRLASPLPMARFRPNIVVSGPPAFAEDGWGKIKIGDLRLRVVKPCSRCKVPNTDIETAEVGVEPGNTLKTFRTGALLGIDIGGKNEVYFGQNLLHDSPKKASFLSVGDPLTIFV 788          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|553182640|ref|XP_005853761.1| (proliferation-associated protein 2g4 [Nannochloropsis gaditana CCMP526] >gi|422295303|gb|EKU22602.1| proliferation-associated protein 2g4 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 683.33 bits (1762), Expect = 0.000e+0
Identity = 339/358 (94.69%), Postives = 342/358 (95.53%), Query Frame = 0
Query:    1 MSSSESGDDLDVKKALGEEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQS 358
            MSSSESGDDL+VKKALGEEEEDAD TLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYP              ATILLLPSGTAKVTGLP+ +
Sbjct:    1 MSSSESGDDLNVKKALGEEEEDADDTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYP--------------ATILLLPSGTAKVTGLPYST 344          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|553182630|ref|XP_005853758.1| (mosc domain protein [Nannochloropsis gaditana CCMP526] >gi|422295300|gb|EKU22599.1| mosc domain protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0
Identity = 307/308 (99.68%), Postives = 307/308 (99.68%), Query Frame = 0
Query:  481 LEAAATGGIIYVAYKGNSRIVWKYKQGEEAGRVVSLHIYPVKSCRGIDVEASLVEARGLVMDRLWMVVTSTGAFRSQRQLPKMALIQPNLPSSFSAPLEMNAPGMPTCVVPVKTSGKRMSVRVWGDTCQGYDQGDDIAGWLTKFLEEEGLRLVRIDEKERRQVDLAFATRGAITGFADGFPFLMTNQASLDDLNSRLASPLPMARFRPNIVVSGPPAFAEDGWGKIKIGDLRLRVVKPCSRCKVPNTDIETAEVGVEPGNTLKTFRTGALLGIDIGGKNEVYFGQNLLHDSPKKASFLSVGDPLTIFV 788
            L AAATGGIIYVAYKGNSRIVWKYKQGEEAGRVVSLHIYPVKSCRGIDVEASLVEARGLVMDRLWMVVTSTGAFRSQRQLPKMALIQPNLPSSFSAPLEMNAPGMPTCVVPVKTSGKRMSVRVWGDTCQGYDQGDDIAGWLTKFLEEEGLRLVRIDEKERRQVDLAFATRGAITGFADGFPFLMTNQASLDDLNSRLASPLPMARFRPNIVVSGPPAFAEDGWGKIKIGDLRLRVVKPCSRCKVPNTDIETAEVGVEPGNTLKTFRTGALLGIDIGGKNEVYFGQNLLHDSPKKASFLSVGDPLTIFV
Sbjct:   10 LLAAATGGIIYVAYKGNSRIVWKYKQGEEAGRVVSLHIYPVKSCRGIDVEASLVEARGLVMDRLWMVVTSTGAFRSQRQLPKMALIQPNLPSSFSAPLEMNAPGMPTCVVPVKTSGKRMSVRVWGDTCQGYDQGDDIAGWLTKFLEEEGLRLVRIDEKERRQVDLAFATRGAITGFADGFPFLMTNQASLDDLNSRLASPLPMARFRPNIVVSGPPAFAEDGWGKIKIGDLRLRVVKPCSRCKVPNTDIETAEVGVEPGNTLKTFRTGALLGIDIGGKNEVYFGQNLLHDSPKKASFLSVGDPLTIFV 317          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|676392551|ref|XP_009039553.1| (hypothetical protein AURANDRAFT_54512 [Aureococcus anophagefferens] >gi|323449829|gb|EGB05714.1| hypothetical protein AURANDRAFT_54512 [Aureococcus anophagefferens])

HSP 1 Score: 439.884 bits (1130), Expect = 9.468e-145
Identity = 205/346 (59.25%), Postives = 270/346 (78.03%), Query Frame = 0
Query:   10 LDVKKALGEEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEA-QEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGL 354
            +D    +   EED +  ++N+DV TKY+EA KIAN+AL  ++ +V+ G   LEL + GD VI +KC  I+ KK+KG+ I+KGVAFPTCVS+NECVCHNSPL S+   E L EGDLVK+D+G ++DG+++V AHT+  G  P+ + P+ GP ADV  AA  A EVA KL++PGN+N QVT+A+A+VAE F V+A  G L H+MKR++IDGNKVI+LRED DQKV+D  FE  E+YS+DVA S+G+GKP+E  SRTT+FKR+VD +Y LKM++SR +FNE+N +FP LPFTLRAL+DE+QARMGVVECLKH+L+HPYPVL E+ GD V HFK T+L+LPSG  ++TGL
Sbjct:    7 IDADDEVENTEEDVELDISNSDVCTKYREAGKIANLALQGLVLQVKPGAKVLELCKFGDMVIIQKCGSIYQKKIKGKLIDKGVAFPTCVSVNECVCHNSPLESDTTSEVLSEGDLVKLDVGCYVDGYIAVAAHTMMCGKQPSIDRPLSGPQADVLHAAHIACEVAQKLLRPGNTNSQVTKAIAKVAEDFSVSACAGVLSHRMKRFVIDGNKVILLREDTDQKVEDFSFELNEVYSIDVAMSTGDGKPKEMISRTTIFKRSVDKNYMLKMRSSRTLFNEINSKFPALPFTLRALDDERQARMGVVECLKHELIHPYPVLFEKKGDYVSHFKFTVLILPSGPTRITGL 352          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|676397415|ref|XP_009041985.1| (hypothetical protein AURANDRAFT_55591 [Aureococcus anophagefferens] >gi|323447382|gb|EGB03305.1| hypothetical protein AURANDRAFT_55591 [Aureococcus anophagefferens])

HSP 1 Score: 429.869 bits (1104), Expect = 7.209e-141
Identity = 203/351 (57.83%), Postives = 272/351 (77.49%), Query Frame = 0
Query:   20 EEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQ-EPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQS---NSSDILKD 366
            +E+ +  ++N+DV TKY+EA KIAN+AL  ++ +V+ G   L+L + GD VI +KC  I+ KKVKG+ I+KGVAFPTCVS+NECVCHNSPL S+A  + LK+GD+VK+D+G ++DG+++V AHT+  G  P+ + P+ G  ADV  AA  A EVA KL++PGN+N QVT+A+ +VAE F V A  G L H+MKR++IDGNKVI+LRE+ DQKV+D  FE  E+YS+DVA S+G+GKP+E  SRTT+FKR+VD +Y LKM++SR +FNE+N +FP LPFTLRALEDE+QARMGVVECLKH+L+HPYPVL E+ GD + HFK T+LLLPSG  ++TGL  ++    S  IL D
Sbjct:   17 DEEVELDISNSDVCTKYREAGKIANLALQGLVLQVKPGAKVLDLCKFGDMVITKKCGTIYQKKVKGKAIDKGVAFPTCVSVNECVCHNSPLESDANIDVLKDGDMVKLDVGCYVDGYIAVAAHTMLCGEQPSLDNPLLGSQADVLHAAHVACEVAQKLLRPGNTNSQVTKAIHKVAEDFNVRACSGVLSHRMKRFVIDGNKVILLREETDQKVEDFCFELNEVYSIDVAMSTGDGKPKEMQSRTTIFKRSVDKNYMLKMRSSRTLFNEVNAKFPALPFTLRALEDERQARMGVVECLKHELIHPYPVLFEKKGDHIAHFKFTVLLLPSGPTRITGLKFEAETIKSDKILSD 367          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|695441281|ref|XP_009533169.1| (methionine aminopeptidase, merops subfamily M24 [Phytophthora sojae] >gi|348670603|gb|EGZ10424.1| methionine aminopeptidase, merops subfamily M24 [Phytophthora sojae])

HSP 1 Score: 387.111 bits (993), Expect = 2.668e-124
Identity = 199/357 (55.74%), Postives = 257/357 (71.99%), Query Frame = 0
Query:    2 SSSESGDDLDVKKALGEEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRV---GPAPTAEEP-IKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGL 354
            S S+  D  +  +A  EE ED     +N+DV TKY+ AA+IA  AL+ VLS++E GK  +EL + GD ++E++C  IF    K + I+KGVAFPT +S NE +CH SPL +E+   LK GD VK+DLG HIDG+++VVAHT  V   G A  AE P +KG  ADV   A  A E+  +LIKPGN+N QVTEA+ ++ E++GV ++QGTLMHQ+KR++IDGNKVI  + DV+ +   V FE  E+Y++DV +++G  KP  +  RTTVFKR VD  YRLKMKASRYVF E+N++FPTLPFT+RA EDE QARMGVVEC+KHDLL  YP+L  RPGD V HFK T+LLLPSGT K+TGL
Sbjct:    8 SVSDVSDVEEEVQAPAEEVEDC----SNSDVVTKYRLAAEIAQSALEGVLSQLEAGKDVVELCKFGDLIVEQRCAAIF----KSKKIDKGVAFPTSISANEIICHFSPLQNESL-VLKAGDWVKIDLGCHIDGYIAVVAHTAIVPAEGSAAAAEFPELKGEEADVLKCAHDAVELCARLIKPGNTNLQVTEALTKLEESYGVKSLQGTLMHQLKRFVIDGNKVIAQKMDVENRTPKVTFEPNEVYTIDVCYTTGSEKPVNSERRTTVFKRQVDKQYRLKMKASRYVFKEINNKFPTLPFTIRAFEDESQARMGVVECVKHDLLQAYPILEGRPGDKVAHFKVTVLLLPSGTTKITGL 355          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|567978603|gb|ETL29090.1| (DNA-binding protein, 42 kDa [Phytophthora parasitica] >gi|570939984|gb|ETP05241.1| DNA-binding protein, 42 kDa [Phytophthora parasitica CJ01A1])

HSP 1 Score: 385.571 bits (989), Expect = 1.031e-123
Identity = 193/346 (55.78%), Postives = 253/346 (73.12%), Query Frame = 0
Query:   18 EEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRV---GPAPTAEEP-IKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQSN 359
            EE ED     +N+DV TKY+ AA+IA  AL  VLS++E GK  +EL + GD ++E++C  IF    K + ++KGVAFPT +S+NE +CH SPLA+E+   +K GD VK+DLG HIDG+++VVAHT  V   G A  AE P +KG  ADV   A  A E+  +LIKPGN+N QVTEA+ ++ E++GV ++QGTLMHQ+KR++IDGNK+I  + DV+ +   V FE  E+Y++DV +++G  KP  +  RTTVFKR VD  YRLKMKASRYVF E+N++FPTLPFT+RA EDE QARMGVVEC+KHDLL  YP+L  R GD V HFK T+LLLP+GT K+TGLP  S+
Sbjct:   24 EEVEDC----SNSDVVTKYKLAAEIAQSALQGVLSQLEAGKDVVELCKFGDLIVEQRCASIF----KSKKVDKGVAFPTSISVNEILCHYSPLANESM-TVKAGDWVKIDLGCHIDGYIAVVAHTAIVPAEGSAADAEFPELKGEEADVLKCAHDAVELCARLIKPGNTNLQVTEALTKLEESYGVKSLQGTLMHQLKRFVIDGNKIIAQKMDVENRTPKVTFEPNEVYTIDVCYTTGGDKPVNSERRTTVFKRQVDKQYRLKMKASRYVFKEINNKFPTLPFTIRAFEDESQARMGVVECVKHDLLQAYPILEGREGDKVAHFKVTVLLLPNGTTKITGLPFPSD 360          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|675208011|ref|XP_008912890.1| (DNA-binding protein, 42 kDa [Phytophthora parasitica INRA-310] >gi|566012511|gb|ETI35422.1| DNA-binding protein, 42 kDa [Phytophthora parasitica P1569] >gi|567949939|gb|ETK75660.1| DNA-binding protein, 42 kDa [Phytophthora parasitica] >gi|568008103|gb|ETL82327.1| DNA-binding protein, 42 kDa [Phytophthora parasitica] >gi|568037992|gb|ETM35541.1| DNA-binding protein, 42 kDa [Phytophthora parasitica] >gi|568086932|gb|ETN01811.1| DNA-binding protein, 42 kDa [Phytophthora parasitica INRA-310] >gi|570970258|gb|ETP33377.1| DNA-binding protein, 42 kDa [Phytophthora parasitica P10297] >gi|970629233|gb|KUF76541.1| Proliferation-associated protein 2G4 [Phytophthora nicotianae] >gi|970661507|gb|KUF98971.1| DNA mismatch repair protein msh-2 [Phytophthora nicotianae])

HSP 1 Score: 384.03 bits (985), Expect = 3.901e-123
Identity = 193/346 (55.78%), Postives = 253/346 (73.12%), Query Frame = 0
Query:   18 EEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRV---GPAPTAEEP-IKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQSN 359
            EE ED     +N+DV TKY+ AA+IA  AL  VLS++E GK  +EL + GD ++E++C  IF    K + ++KGVAFPT +S+NE +CH SPLA+E+   +K GD VK+DLG HIDG+++VVAHT  V   G A  AE P +KG  ADV   A  A E+  +LIKPGN+N QVTEA+ ++ E++GV ++QGTLMHQ+KR++IDGNK+I  + DV+ +   V FE  E+Y++DV +++G  KP  +  RTTVFKR VD  YRLKMKASRYVF E+N++FPTLPFT+RA EDE QARMGVVEC+KHDLL  YP+L  R GD V HFK T+LLLP+GT K+TGLP  S+
Sbjct:   24 EEVEDC----SNSDVVTKYKLAAEIAQSALQGVLSQLEAGKDVVELCKFGDLIVEQRCAGIF----KSKKVDKGVAFPTSISVNEILCHYSPLANESM-TVKAGDWVKIDLGCHIDGYIAVVAHTAIVPAEGSAADAEFPELKGEEADVLKCAHDAVELCARLIKPGNTNLQVTEALTKLEESYGVKSLQGTLMHQLKRFVIDGNKIIAQKMDVENRTPKVTFEPNEVYTIDVCYTTGGDKPVNSERRTTVFKRQVDKQYRLKMKASRYVFKEINNKFPTLPFTIRAFEDESQARMGVVECVKHDLLQAYPILEGREGDKVAHFKVTVLLLPNGTTKITGLPFPSD 360          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|1214704142|gb|OWZ16044.1| (DNA-binding protein [Phytophthora megakarya])

HSP 1 Score: 380.948 bits (977), Expect = 7.613e-122
Identity = 187/331 (56.50%), Postives = 245/331 (74.02%), Query Frame = 0
Query:   28 ANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRV---GPAPTAEEP-IKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGL 354
            +N+DV TKY+ A++IA  AL  VLS++E GK  +EL + GD ++E++C  IF    K + I+KG+AFPT +S NE +CH SPL +E+   +K GD VK+DLG HIDG+++VVAHT  V   G A  AE P +KG  ADV   A  A E+  +LIKPGN+N QVTEA+ ++ E++GV ++QGTLMHQ+KR++IDGNK+I  + DV+ +   V FE  E+Y++DV +++G  KP  +  RTTVFKR VD  YRLKMKASRYVF E+N++FPTLPFT+RA EDE QARMGVVEC+KHDLL  YP+L  RPGD V HFK T+LLLPSGT K+TGL
Sbjct:   30 SNSDVVTKYKLASEIAQSALQGVLSQLEAGKDVVELCKFGDLIVEQRCAAIF----KSKKIDKGLAFPTSISANEIICHYSPLPNESM-TVKAGDWVKIDLGCHIDGYIAVVAHTAIVPAEGSAADAEFPELKGEEADVLKCAHDAVELCARLIKPGNTNLQVTEALTKLEESYGVKSLQGTLMHQLKRFVIDGNKMIAQKIDVENRTPKVTFEPNEVYTIDVCYTTGSDKPVNSERRTTVFKRQVDKQYRLKMKASRYVFKEINNKFPTLPFTIRAFEDESQARMGVVECVKHDLLQAYPILEGRPGDKVAHFKVTVLLLPSGTTKITGL 355          
BLAST of EWM29247.1 vs. NCBI_GenBank
Match: gi|301102937|ref|XP_002900555.1| (proliferation-associated protein, metalloprotease family M24X, putative [Phytophthora infestans T30-4] >gi|262101818|gb|EEY59870.1| proliferation-associated protein, metalloprotease family M24X, putative [Phytophthora infestans T30-4])

HSP 1 Score: 376.711 bits (966), Expect = 3.210e-120
Identity = 186/335 (55.52%), Postives = 245/335 (73.13%), Query Frame = 0
Query:   28 ANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRV---GPAPTAEEP-IKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRYVFNEMNHRFPTLPFTLRALEDEKQARMGVVECLKHDLLHPYPVLMERPGDIVVHFKATILLLPSGTAKVTGLPHQS 358
            +N+DV TKY+ A++IA  AL  VLS++E GK  +EL + GD ++E++C  IF    K + ++KG+AFPT +S+NE +CH SPLA+E+   +K GD VK+DLG HIDG+++VVAHT  V   G A  AE P +KG  ADV   A  A E+  +LIKPGN+N QVTEA+ ++  ++GV ++QGTLMHQ+KR++IDGNK+I  + DV+ +   V FE  E Y++DV +++G  KP  +  RTTVFKR VD  YRLKMKASRYVF E+N +FPTLPFT+RA EDE QARMGVVEC+KHDLL  YP+L  R GD V HFK T+LLLP+GT K+TGLP  S
Sbjct:   30 SNSDVVTKYKLASEIAQSALQGVLSQLEAGKDVVELCKFGDLIVEQRCAGIF----KSKKVDKGLAFPTSISVNEILCHYSPLANESM-TVKAGDWVKIDLGCHIDGYIAVVAHTAIVPAEGSAADAEFPELKGEEADVLKCAHDAVELCARLIKPGNTNLQVTEALTKLETSYGVKSLQGTLMHQLKRFVIDGNKMIAQKMDVENRTPKVTFEPNEAYTIDVCYTTGSDKPVNSERRTTVFKRQVDKQYRLKMKASRYVFKEINTKFPTLPFTIRAFEDESQARMGVVECVKHDLLQAYPILEGRAGDKVAHFKVTVLLLPNGTTKITGLPFPS 359          
The following BLAST results are available for this feature:
BLAST of EWM29247.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111769|gb|EWM29247.1|0.000e+0100.00proliferation-associated protein 2g4 [Nannochlorop... [more]
gi|553182640|ref|XP_005853761.1|0.000e+094.69proliferation-associated protein 2g4 [Nannochlorop... [more]
gi|553182630|ref|XP_005853758.1|0.000e+099.68mosc domain protein [Nannochloropsis gaditana CCMP... [more]
gi|676392551|ref|XP_009039553.1|9.468e-14559.25hypothetical protein AURANDRAFT_54512 [Aureococcus... [more]
gi|676397415|ref|XP_009041985.1|7.209e-14157.83hypothetical protein AURANDRAFT_55591 [Aureococcus... [more]
gi|695441281|ref|XP_009533169.1|2.668e-12455.74methionine aminopeptidase, merops subfamily M24 [P... [more]
gi|567978603|gb|ETL29090.1|1.031e-12355.78DNA-binding protein, 42 kDa [Phytophthora parasiti... [more]
gi|675208011|ref|XP_008912890.1|3.901e-12355.78DNA-binding protein, 42 kDa [Phytophthora parasiti... [more]
gi|1214704142|gb|OWZ16044.1|7.613e-12256.50DNA-binding protein [Phytophthora megakarya][more]
gi|301102937|ref|XP_002900555.1|3.210e-12055.52proliferation-associated protein, metalloprotease ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1428rna1428Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications