cbbX, cp-cbbX (gene) Nannochloropsis oceanica

Overview
NamecbbX
Unique Namecp-cbbX
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1011
Alignment locationKC598086.1:9644..10654 -

Link to JBrowse

Properties
Property NameValue
Gene biotypeprotein_coding
GenecbbX
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KC598086.1chloroplast_chromosomeKC598086.1:9644..10654 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
Relationships

The following CDS feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
AGI98858.1cds-AGI98858.1Nannochloropsis oceanica (N. oceanica IMET1)CDS


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
cbbXcp-cbbX-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>cp-cbbX ID=cp-cbbX|Name=cbbX|organism=Nannochloropsis oceanica|type=gene|length=1011bp
ATGGATTCTAAAAATATTGATATTCAAGAATTAAGGAAAACTTATAAGAT
TAATGACAGTCTAAAAAAATTAGATGATGATCTTATCGGTTTACAATCTG
TTAAAAAAAGAATTACTGAAATTACAGCTATTCTTTTTATGGATAAAATT
CGCCAAGATTTTGGATTAAGCAAATACTACCCCGGACTTCATATGTCATT
CACAGGTAGTCCTGGAACAGGAAAGAGTACTGTTGCTTCCAGAATGGCAG
AGCTGCTACAAAACCTAGGGTATTTGTCTCGTGGGCAACTTGTGGTAGTT
AGTCGTGATGATCTTGTAGCTCAATTTGTAGGCCAAACAGCTCCCAAAAC
AAAAGATGTTTTAGAAAAAGCAATGGGTGGTGTTTTACTAATTGACGAAG
CTTATTATCTTTATAAACCCAATAATGAAAAAGATTATGGTGGTGAAGCA
ATTGAAATGATCCTCCAAGTAATGGAAAACAATCGTACTGATATCGTATT
GATCTTCGCGGGTTATAGTGAACCTATGAAGCTCTTCTATCGTTCAAATC
CTGGTTTATCTTCTCGTGTAGCACATCATATTGATTTTCCTGATTATACA
CGTGAAGAGCTGCTAACAATTGCAAAATTACTTTTTGAAGAAAGACAGTA
TCAAATGAGTTTTTATGCGGAAGAAGTCTTTATAAAATACTTAGACTTAA
GACGTCAACTTCCTCTTTTTGCAAATGCAAGAAGTATAAAAAATATTGTA
AATCGTGCATGTTTTAGATTAGCATCACGTGTAATGGGTCAAACAAATAT
TTTTACATACAAGAGTTTAATTAATATTACCCCTTACGATCTAATCTTAA
GTACTTTATTTCTTAAAGGATTAAGAACAATTCTTATGACAAAACAGGGT
TATAAGGATAATAATGCTATATTTAACGTTCCAGAACTAAGCAAAAAATC
AAATGAAACTAGTAGAGATTCTAAAACCTTTACATTATTTATTTGGAAAA
ATTTTGCATAA
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protein sequence of cbbX

>cp-cbbX-protein ID=cp-cbbX-protein|Name=cbbX|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MDSKNIDIQELRKTYKINDSLKKLDDDLIGLQSVKKRITEITAILFMDKI
RQDFGLSKYYPGLHMSFTGSPGTGKSTVASRMAELLQNLGYLSRGQLVVV
SRDDLVAQFVGQTAPKTKDVLEKAMGGVLLIDEAYYLYKPNNEKDYGGEA
IEMILQVMENNRTDIVLIFAGYSEPMKLFYRSNPGLSSRVAHHIDFPDYT
REELLTIAKLLFEERQYQMSFYAEEVFIKYLDLRRQLPLFANARSIKNIV
NRACFRLASRVMGQTNIFTYKSLINITPYDLILSTLFLKGLRTILMTKQG
YKDNNAIFNVPELSKKSNETSRDSKTFTLFIWKNFA
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Synonyms
Publications