scaffold52, scaffold52 (supercontig) Nannochloropsis salina

Overview
Namescaffold52
Unique Namescaffold52
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length62974
Alignment locationNSK008400:126..1763 -
Alignment locationNSK008400t:126..1763 -
Alignment locationNSK008401:3067..5169 +
Alignment locationNSK008401t:3067..5169 +
Alignment locationNSK008402:6356..8713 +
Alignment locationNSK008402t:6356..8713 +
Alignment locationNSK008403:9139..10582 -
Alignment locationNSK008403t:9139..10582 -
Alignment locationNSK008404:12061..14008 +
Alignment locationNSK008404t:12061..14008 +
Alignment locationNSK008405:14382..15787 +
Alignment locationNSK008405t:14382..15787 +
Alignment locationNSK008406:16712..17855 -
Alignment locationNSK008406t:16712..17855 -
Alignment locationNSK008407:18197..23271 +
Alignment locationNSK008407t:18197..23271 +
Alignment locationNSK008408:23072..23408 -
Alignment locationNSK008408t:23072..23408 -
Alignment locationNSK008409:23876..29734 -
Alignment locationNSK008409t:23876..29734 -
Alignment locationNSK008410:30222..35270 +
Alignment locationNSK008410t:30222..35270 +
Alignment locationNSK008411:35839..40809 -
Alignment locationNSK008411t:35839..40809 -
Alignment locationNSK008412:41783..44403 -
Alignment locationNSK008412t:41783..44403 -
Alignment locationNSK008413:42423..43108 +
Alignment locationNSK008413t:42423..43108 +
Alignment locationNSK008414:45000..47053 +
Alignment locationNSK008414t:45000..47053 +
Alignment locationNSK008415:47634..51315 -
Alignment locationNSK008415t:47634..51315 -
Alignment locationNSK008416:54887..57455 +
Alignment locationNSK008416t:54887..57455 +
Alignment locationNSK008417:56307..56590 -
Alignment locationNSK008417t:56307..56590 -
Alignment locationNSK008418:58711..59433 -
Alignment locationNSK008418t:58711..59433 -
Alignment locationNSK008419:59518..60292 -
Alignment locationNSK008419t:59518..60292 -
Alignment locationNSK008420:61488..62192 +
Alignment locationNSK008420t:61488..62192 +
Alignment locationNSK008421:62444..62907 -
Alignment locationNSK008421t:62444..62907 -
Alignment locationnonsR104:127..62907 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK008400geneNSK008400:126..1763 -
NSK008400tmRNANSK008400t:126..1763 -
NSK008401geneNSK008401:3067..5169 +
NSK008401tmRNANSK008401t:3067..5169 +
NSK008402geneNSK008402:6356..8713 +
NSK008402tmRNANSK008402t:6356..8713 +
NSK008403geneNSK008403:9139..10582 -
NSK008403tmRNANSK008403t:9139..10582 -
NSK008404geneNSK008404:12061..14008 +
NSK008404tmRNANSK008404t:12061..14008 +
NSK008405geneNSK008405:14382..15787 +
NSK008405tmRNANSK008405t:14382..15787 +
NSK008406geneNSK008406:16712..17855 -
NSK008406tmRNANSK008406t:16712..17855 -
NSK008407geneNSK008407:18197..23271 +
NSK008407tmRNANSK008407t:18197..23271 +
NSK008408geneNSK008408:23072..23408 -
NSK008408tmRNANSK008408t:23072..23408 -
NSK008409geneNSK008409:23876..29734 -
NSK008409tmRNANSK008409t:23876..29734 -
NSK008410geneNSK008410:30222..35270 +
NSK008410tmRNANSK008410t:30222..35270 +
NSK008411geneNSK008411:35839..40809 -
NSK008411tmRNANSK008411t:35839..40809 -
NSK008412geneNSK008412:41783..44403 -
NSK008412tmRNANSK008412t:41783..44403 -
NSK008413geneNSK008413:42423..43108 +
NSK008413tmRNANSK008413t:42423..43108 +
NSK008414geneNSK008414:45000..47053 +
NSK008414tmRNANSK008414t:45000..47053 +
NSK008415geneNSK008415:47634..51315 -
NSK008415tmRNANSK008415t:47634..51315 -
NSK008416geneNSK008416:54887..57455 +
NSK008416tmRNANSK008416t:54887..57455 +
NSK008417geneNSK008417:56307..56590 -
NSK008417tmRNANSK008417t:56307..56590 -
NSK008418geneNSK008418:58711..59433 -
NSK008418tmRNANSK008418t:58711..59433 -
NSK008419geneNSK008419:59518..60292 -
NSK008419tmRNANSK008419t:59518..60292 -
NSK008420geneNSK008420:61488..62192 +
NSK008420tmRNANSK008420t:61488..62192 +
NSK008421geneNSK008421:62444..62907 -
NSK008421tmRNANSK008421t:62444..62907 -
nonsR104syntenic_regionnonsR104:127..62907 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications