scaffold49, scaffold49 (supercontig) Nannochloropsis salina

Overview
Namescaffold49
Unique Namescaffold49
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length71969
Alignment locationNSK007683:120..2334 -
Alignment locationNSK007683t:120..2334 -
Alignment locationNSK007684:3042..3376 -
Alignment locationNSK007684t:3042..3376 -
Alignment locationNSK007685:5046..7866 +
Alignment locationNSK007685t:5046..7866 +
Alignment locationNSK007686:8890..11945 +
Alignment locationNSK007686t:8890..11945 +
Alignment locationNSK007687:13377..17389 +
Alignment locationNSK007687t:13377..17389 +
Alignment locationNSK007688:20478..21057 -
Alignment locationNSK007688t:20478..21057 -
Alignment locationNSK007689:21023..21838 -
Alignment locationNSK007689t:21023..21838 -
Alignment locationNSK007690:21086..28247 +
Alignment locationNSK007690t:21086..28247 +
Alignment locationNSK007691:29604..31530 +
Alignment locationNSK007691t:29604..31530 +
Alignment locationNSK007692:32146..33481 -
Alignment locationNSK007692t:32146..33481 -
Alignment locationNSK007693:32683..34785 -
Alignment locationNSK007693t:32683..34785 -
Alignment locationNSK007694:35316..39021 +
Alignment locationNSK007694t:35316..39021 +
Alignment locationNSK007695:39801..40989 -
Alignment locationNSK007695t:39801..40989 -
Alignment locationNSK007696:42056..44239 -
Alignment locationNSK007696t:42056..44239 -
Alignment locationNSK007697:44827..48491 -
Alignment locationNSK007697t:44827..48491 -
Alignment locationNSK007698:49051..50657 +
Alignment locationNSK007698t:49051..50657 +
Alignment locationNSK007699:50968..51995 -
Alignment locationNSK007699t:50968..51995 -
Alignment locationNSK007700:52883..54191 -
Alignment locationNSK007700t:52883..54191 -
Alignment locationNSK007701:54394..55623 +
Alignment locationNSK007701t:54394..55623 +
Alignment locationNSK007702:55713..57018 +
Alignment locationNSK007702t:55713..57018 +
Alignment locationNSK007703:57788..59042 -
Alignment locationNSK007703t:57788..59042 -
Alignment locationNSK007704:59871..65777 +
Alignment locationNSK007704t:59871..65777 +
Alignment locationNSK007705:68409..71474 +
Alignment locationNSK007705t:68409..71474 +
Alignment locationnonsR014:44828..65777 +
Alignment locationnonsR015:121..55623 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK007683geneNSK007683:120..2334 -
NSK007683tmRNANSK007683t:120..2334 -
NSK007684geneNSK007684:3042..3376 -
NSK007684tmRNANSK007684t:3042..3376 -
NSK007685geneNSK007685:5046..7866 +
NSK007685tmRNANSK007685t:5046..7866 +
NSK007686geneNSK007686:8890..11945 +
NSK007686tmRNANSK007686t:8890..11945 +
NSK007687geneNSK007687:13377..17389 +
NSK007687tmRNANSK007687t:13377..17389 +
NSK007688geneNSK007688:20478..21057 -
NSK007688tmRNANSK007688t:20478..21057 -
NSK007689geneNSK007689:21023..21838 -
NSK007689tmRNANSK007689t:21023..21838 -
NSK007690geneNSK007690:21086..28247 +
NSK007690tmRNANSK007690t:21086..28247 +
NSK007691geneNSK007691:29604..31530 +
NSK007691tmRNANSK007691t:29604..31530 +
NSK007692geneNSK007692:32146..33481 -
NSK007692tmRNANSK007692t:32146..33481 -
NSK007693geneNSK007693:32683..34785 -
NSK007693tmRNANSK007693t:32683..34785 -
NSK007694geneNSK007694:35316..39021 +
NSK007694tmRNANSK007694t:35316..39021 +
NSK007695geneNSK007695:39801..40989 -
NSK007695tmRNANSK007695t:39801..40989 -
NSK007696geneNSK007696:42056..44239 -
NSK007696tmRNANSK007696t:42056..44239 -
NSK007697geneNSK007697:44827..48491 -
NSK007697tmRNANSK007697t:44827..48491 -
NSK007698geneNSK007698:49051..50657 +
NSK007698tmRNANSK007698t:49051..50657 +
NSK007699geneNSK007699:50968..51995 -
NSK007699tmRNANSK007699t:50968..51995 -
NSK007700geneNSK007700:52883..54191 -
NSK007700tmRNANSK007700t:52883..54191 -
NSK007701geneNSK007701:54394..55623 +
NSK007701tmRNANSK007701t:54394..55623 +
NSK007702geneNSK007702:55713..57018 +
NSK007702tmRNANSK007702t:55713..57018 +
NSK007703geneNSK007703:57788..59042 -
NSK007703tmRNANSK007703t:57788..59042 -
NSK007704geneNSK007704:59871..65777 +
NSK007704tmRNANSK007704t:59871..65777 +
NSK007705geneNSK007705:68409..71474 +
NSK007705tmRNANSK007705t:68409..71474 +
nonsR014syntenic_regionnonsR014:44828..65777 +
nonsR015syntenic_regionnonsR015:121..55623 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications