scaffold46, scaffold46 (supercontig) Nannochloropsis salina

Overview
Namescaffold46
Unique Namescaffold46
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length76889
Alignment locationNSK007586:370..2171 -
Alignment locationNSK007586t:370..2171 -
Alignment locationNSK007587:446..1787 +
Alignment locationNSK007587t:446..1787 +
Alignment locationNSK007588:2563..3081 +
Alignment locationNSK007588t:2563..3081 +
Alignment locationNSK007589:3796..4120 -
Alignment locationNSK007589t:3796..4120 -
Alignment locationNSK007590:3825..4262 +
Alignment locationNSK007590t:3825..4262 +
Alignment locationNSK007591:4351..5750 +
Alignment locationNSK007591t:4351..5750 +
Alignment locationNSK007592:6464..7634 -
Alignment locationNSK007592t:6464..7634 -
Alignment locationNSK007593:8416..11299 -
Alignment locationNSK007593t:8416..11299 -
Alignment locationNSK007594:12714..14010 -
Alignment locationNSK007594t:12714..14010 -
Alignment locationNSK007595:14681..15312 +
Alignment locationNSK007595t:14681..15312 +
Alignment locationNSK007596:15393..16017 +
Alignment locationNSK007596t:15393..16017 +
Alignment locationNSK007597:15524..16407 -
Alignment locationNSK007597t:15524..16407 -
Alignment locationNSK007598:17631..19148 -
Alignment locationNSK007598t:17631..19148 -
Alignment locationNSK007599:19933..21165 -
Alignment locationNSK007599t:19933..21165 -
Alignment locationNSK007600:21749..21985 -
Alignment locationNSK007600t:21749..21985 -
Alignment locationNSK007601:22120..25129 -
Alignment locationNSK007601t:22120..25129 -
Alignment locationNSK007602:25543..29591 -
Alignment locationNSK007602t:25543..29591 -
Alignment locationNSK007603:30693..31354 +
Alignment locationNSK007603t:30693..31354 +
Alignment locationNSK007604:31209..32381 -
Alignment locationNSK007604t:31209..32381 -
Alignment locationNSK007605:32846..33056 -
Alignment locationNSK007605t:32846..33056 -
Alignment locationNSK007606:33619..34000 +
Alignment locationNSK007606t:33619..34000 +
Alignment locationNSK007607:34065..36041 -
Alignment locationNSK007607t:34065..36041 -
Alignment locationNSK007608:38386..39486 +
Alignment locationNSK007608t:38386..39486 +
Alignment locationNSK007609:39994..41568 +
Alignment locationNSK007609t:39994..41568 +
Alignment locationNSK007610:41530..41759 -
Alignment locationNSK007610t:41530..41759 -
Alignment locationNSK007611:42127..43254 -
Alignment locationNSK007611t:42127..43254 -
Alignment locationNSK007612:42604..42812 +
Alignment locationNSK007612t:42604..42812 +
Alignment locationNSK007613:43694..45295 +
Alignment locationNSK007613t:43694..45295 +
Alignment locationNSK007614:46420..47664 +
Alignment locationNSK007614t:46420..47664 +
Alignment locationNSK007615:48001..49174 -
Alignment locationNSK007615t:48001..49174 -
Alignment locationNSK007616:49264..49474 -
Alignment locationNSK007616t:49264..49474 -
Alignment locationNSK007617:49572..49813 +
Alignment locationNSK007617t:49572..49813 +
Alignment locationNSK007618:49899..50729 -
Alignment locationNSK007618t:49899..50729 -
Alignment locationNSK007619:50064..51857 +
Alignment locationNSK007619t:50064..51857 +
Alignment locationNSK007620:52294..57284 -
Alignment locationNSK007620t:52294..57284 -
Alignment locationNSK007621:57838..59809 -
Alignment locationNSK007621t:57838..59809 -
Alignment locationNSK007622:60310..61826 -
Alignment locationNSK007622t:60310..61826 -
Alignment locationNSK007623:62141..63899 +
Alignment locationNSK007623t:62141..63899 +
Alignment locationNSK007624:64490..65884 -
Alignment locationNSK007624t:64490..65884 -
Alignment locationNSK007625:68249..69912 -
Alignment locationNSK007625t:68249..69912 -
Alignment locationNSK007626:73404..74850 +
Alignment locationNSK007626t:73404..74850 +
Alignment locationNSK007627:74936..75734 +
Alignment locationNSK007627t:74936..75734 +
Alignment locationNSK007628:75903..76833 -
Alignment locationNSK007628t:75903..76833 -
Alignment locationnonsR075:371..57284 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK007586geneNSK007586:370..2171 -
NSK007586tmRNANSK007586t:370..2171 -
NSK007587geneNSK007587:446..1787 +
NSK007587tmRNANSK007587t:446..1787 +
NSK007588geneNSK007588:2563..3081 +
NSK007588tmRNANSK007588t:2563..3081 +
NSK007589geneNSK007589:3796..4120 -
NSK007589tmRNANSK007589t:3796..4120 -
NSK007590geneNSK007590:3825..4262 +
NSK007590tmRNANSK007590t:3825..4262 +
NSK007591geneNSK007591:4351..5750 +
NSK007591tmRNANSK007591t:4351..5750 +
NSK007592geneNSK007592:6464..7634 -
NSK007592tmRNANSK007592t:6464..7634 -
NSK007593geneNSK007593:8416..11299 -
NSK007593tmRNANSK007593t:8416..11299 -
NSK007594geneNSK007594:12714..14010 -
NSK007594tmRNANSK007594t:12714..14010 -
NSK007595geneNSK007595:14681..15312 +
NSK007595tmRNANSK007595t:14681..15312 +
NSK007596geneNSK007596:15393..16017 +
NSK007596tmRNANSK007596t:15393..16017 +
NSK007597geneNSK007597:15524..16407 -
NSK007597tmRNANSK007597t:15524..16407 -
NSK007598geneNSK007598:17631..19148 -
NSK007598tmRNANSK007598t:17631..19148 -
NSK007599geneNSK007599:19933..21165 -
NSK007599tmRNANSK007599t:19933..21165 -
NSK007600geneNSK007600:21749..21985 -
NSK007600tmRNANSK007600t:21749..21985 -
NSK007601geneNSK007601:22120..25129 -
NSK007601tmRNANSK007601t:22120..25129 -
NSK007602geneNSK007602:25543..29591 -
NSK007602tmRNANSK007602t:25543..29591 -
NSK007603geneNSK007603:30693..31354 +
NSK007603tmRNANSK007603t:30693..31354 +
NSK007604geneNSK007604:31209..32381 -
NSK007604tmRNANSK007604t:31209..32381 -
NSK007605geneNSK007605:32846..33056 -
NSK007605tmRNANSK007605t:32846..33056 -
NSK007606geneNSK007606:33619..34000 +
NSK007606tmRNANSK007606t:33619..34000 +
NSK007607geneNSK007607:34065..36041 -
NSK007607tmRNANSK007607t:34065..36041 -
NSK007608geneNSK007608:38386..39486 +
NSK007608tmRNANSK007608t:38386..39486 +
NSK007609geneNSK007609:39994..41568 +
NSK007609tmRNANSK007609t:39994..41568 +
NSK007610geneNSK007610:41530..41759 -
NSK007610tmRNANSK007610t:41530..41759 -
NSK007611geneNSK007611:42127..43254 -
NSK007611tmRNANSK007611t:42127..43254 -
NSK007612geneNSK007612:42604..42812 +
NSK007612tmRNANSK007612t:42604..42812 +
NSK007613geneNSK007613:43694..45295 +
NSK007613tmRNANSK007613t:43694..45295 +
NSK007614geneNSK007614:46420..47664 +
NSK007614tmRNANSK007614t:46420..47664 +
NSK007615geneNSK007615:48001..49174 -
NSK007615tmRNANSK007615t:48001..49174 -
NSK007616geneNSK007616:49264..49474 -
NSK007616tmRNANSK007616t:49264..49474 -
NSK007617geneNSK007617:49572..49813 +
NSK007617tmRNANSK007617t:49572..49813 +
NSK007618geneNSK007618:49899..50729 -
NSK007618tmRNANSK007618t:49899..50729 -
NSK007619geneNSK007619:50064..51857 +
NSK007619tmRNANSK007619t:50064..51857 +
NSK007620geneNSK007620:52294..57284 -
NSK007620tmRNANSK007620t:52294..57284 -
NSK007621geneNSK007621:57838..59809 -
NSK007621tmRNANSK007621t:57838..59809 -
NSK007622geneNSK007622:60310..61826 -
NSK007622tmRNANSK007622t:60310..61826 -
NSK007623geneNSK007623:62141..63899 +
NSK007623tmRNANSK007623t:62141..63899 +
NSK007624geneNSK007624:64490..65884 -
NSK007624tmRNANSK007624t:64490..65884 -
NSK007625geneNSK007625:68249..69912 -
NSK007625tmRNANSK007625t:68249..69912 -
NSK007626geneNSK007626:73404..74850 +
NSK007626tmRNANSK007626t:73404..74850 +
NSK007627geneNSK007627:74936..75734 +
NSK007627tmRNANSK007627t:74936..75734 +
NSK007628geneNSK007628:75903..76833 -
NSK007628tmRNANSK007628t:75903..76833 -
nonsR075syntenic_regionnonsR075:371..57284 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications