scaffold37, scaffold37 (supercontig) Nannochloropsis salina

Overview
Namescaffold37
Unique Namescaffold37
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length156673
Alignment locationNSK006429:30..6035 -
Alignment locationNSK006429t:30..6035 -
Alignment locationNSK006430:6488..7239 -
Alignment locationNSK006430t:6488..7239 -
Alignment locationNSK006431:8129..14796 -
Alignment locationNSK006431t:8129..14796 -
Alignment locationNSK006432:8878..9418 +
Alignment locationNSK006432t:8878..9418 +
Alignment locationNSK006433:10535..11339 -
Alignment locationNSK006433t:10535..11339 -
Alignment locationNSK006434:15249..16000 -
Alignment locationNSK006434t:15249..16000 -
Alignment locationNSK006435:17329..24010 -
Alignment locationNSK006435t:17329..24010 -
Alignment locationNSK006436:24463..25214 -
Alignment locationNSK006436t:24463..25214 -
Alignment locationNSK006437:26544..39016 -
Alignment locationNSK006437t:26544..39016 -
Alignment locationNSK006438:39317..40271 +
Alignment locationNSK006438t:39317..40271 +
Alignment locationNSK006439:39959..43943 -
Alignment locationNSK006439t:39959..43943 -
Alignment locationNSK006440:44978..45849 +
Alignment locationNSK006440t:44978..45849 +
Alignment locationNSK006441:46358..46631 +
Alignment locationNSK006441t:46358..46631 +
Alignment locationNSK006442:46701..51052 -
Alignment locationNSK006442t:46701..51052 -
Alignment locationNSK006443:53738..55840 +
Alignment locationNSK006443t:53738..55840 +
Alignment locationNSK006444:57106..59328 -
Alignment locationNSK006444t:57106..59328 -
Alignment locationNSK006445:59752..60158 -
Alignment locationNSK006445t:59752..60158 -
Alignment locationNSK006446:60165..61482 +
Alignment locationNSK006446t:60165..61482 +
Alignment locationNSK006447:63492..64640 +
Alignment locationNSK006447t:63492..64640 +
Alignment locationNSK006448:67061..79329 +
Alignment locationNSK006448t:67061..79329 +
Alignment locationNSK006449:79814..82353 -
Alignment locationNSK006449t:79814..82353 -
Alignment locationNSK006450:81086..81390 +
Alignment locationNSK006450t:81086..81390 +
Alignment locationNSK006451:81661..83408 -
Alignment locationNSK006451t:81661..83408 -
Alignment locationNSK006452:85365..86573 +
Alignment locationNSK006452t:85365..86573 +
Alignment locationNSK006453:88344..89457 +
Alignment locationNSK006453t:88344..89457 +
Alignment locationNSK006454:91283..95391 +
Alignment locationNSK006454t:91283..95391 +
Alignment locationNSK006455:94883..95083 +
Alignment locationNSK006455t:94883..95083 +
Alignment locationNSK006456:95096..95809 -
Alignment locationNSK006456t:95096..95809 -
Alignment locationNSK006457:96055..98417 -
Alignment locationNSK006457t:96055..98417 -
Alignment locationNSK006458:98541..100464 +
Alignment locationNSK006458t:98541..100464 +
Alignment locationNSK006459:100473..101438 +
Alignment locationNSK006459t:100473..101438 +
Alignment locationNSK006460:100514..101532 +
Alignment locationNSK006460t:100514..101532 +
Alignment locationNSK006461:102191..103978 +
Alignment locationNSK006461t:102191..103978 +
Alignment locationNSK006462:104092..104329 -
Alignment locationNSK006462t:104092..104329 -
Alignment locationNSK006463:104503..105519 -
Alignment locationNSK006463t:104503..105519 -
Alignment locationNSK006464:105101..105783 -
Alignment locationNSK006464t:105101..105783 -
Alignment locationNSK006465:107929..111715 -
Alignment locationNSK006465t:107929..111715 -
Alignment locationNSK006466:113820..116557 +
Alignment locationNSK006466t:113820..116557 +
Alignment locationNSK006467:117675..120830 -
Alignment locationNSK006467t:117675..120830 -
Alignment locationNSK006468:122562..124036 -
Alignment locationNSK006468t:122562..124036 -
Alignment locationNSK006469:123695..124331 +
Alignment locationNSK006469t:123695..124331 +
Alignment locationNSK006470:124873..126541 +
Alignment locationNSK006470t:124873..126541 +
Alignment locationNSK006471:127705..128635 +
Alignment locationNSK006471t:127705..128635 +
Alignment locationNSK006472:128770..129399 -
Alignment locationNSK006472t:128770..129399 -
Alignment locationNSK006473:128788..129347 -
Alignment locationNSK006473t:128788..129347 -
Alignment locationNSK006474:129738..130811 +
Alignment locationNSK006474t:129738..130811 +
Alignment locationNSK006475:131374..136123 -
Alignment locationNSK006475t:131374..136123 -
Alignment locationNSK006476:136610..136953 +
Alignment locationNSK006476t:136610..136953 +
Alignment locationNSK006477:136926..137188 -
Alignment locationNSK006477t:136926..137188 -
Alignment locationNSK006478:137756..147998 -
Alignment locationNSK006478t:137756..147998 -
Alignment locationNSK006479:149208..156217 -
Alignment locationNSK006479t:149208..156217 -
Alignment locationnonsR001:26545..156217 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK006429geneNSK006429:30..6035 -
NSK006429tmRNANSK006429t:30..6035 -
NSK006430geneNSK006430:6488..7239 -
NSK006430tmRNANSK006430t:6488..7239 -
NSK006431geneNSK006431:8129..14796 -
NSK006431tmRNANSK006431t:8129..14796 -
NSK006432geneNSK006432:8878..9418 +
NSK006432tmRNANSK006432t:8878..9418 +
NSK006433geneNSK006433:10535..11339 -
NSK006433tmRNANSK006433t:10535..11339 -
NSK006434geneNSK006434:15249..16000 -
NSK006434tmRNANSK006434t:15249..16000 -
NSK006435geneNSK006435:17329..24010 -
NSK006435tmRNANSK006435t:17329..24010 -
NSK006436geneNSK006436:24463..25214 -
NSK006436tmRNANSK006436t:24463..25214 -
NSK006437geneNSK006437:26544..39016 -
NSK006437tmRNANSK006437t:26544..39016 -
NSK006438geneNSK006438:39317..40271 +
NSK006438tmRNANSK006438t:39317..40271 +
NSK006439geneNSK006439:39959..43943 -
NSK006439tmRNANSK006439t:39959..43943 -
NSK006440geneNSK006440:44978..45849 +
NSK006440tmRNANSK006440t:44978..45849 +
NSK006441geneNSK006441:46358..46631 +
NSK006441tmRNANSK006441t:46358..46631 +
NSK006442geneNSK006442:46701..51052 -
NSK006442tmRNANSK006442t:46701..51052 -
NSK006443geneNSK006443:53738..55840 +
NSK006443tmRNANSK006443t:53738..55840 +
NSK006444geneNSK006444:57106..59328 -
NSK006444tmRNANSK006444t:57106..59328 -
NSK006445geneNSK006445:59752..60158 -
NSK006445tmRNANSK006445t:59752..60158 -
NSK006446geneNSK006446:60165..61482 +
NSK006446tmRNANSK006446t:60165..61482 +
NSK006447geneNSK006447:63492..64640 +
NSK006447tmRNANSK006447t:63492..64640 +
NSK006448geneNSK006448:67061..79329 +
NSK006448tmRNANSK006448t:67061..79329 +
NSK006449geneNSK006449:79814..82353 -
NSK006449tmRNANSK006449t:79814..82353 -
NSK006450geneNSK006450:81086..81390 +
NSK006450tmRNANSK006450t:81086..81390 +
NSK006451geneNSK006451:81661..83408 -
NSK006451tmRNANSK006451t:81661..83408 -
NSK006452geneNSK006452:85365..86573 +
NSK006452tmRNANSK006452t:85365..86573 +
NSK006453geneNSK006453:88344..89457 +
NSK006453tmRNANSK006453t:88344..89457 +
NSK006454geneNSK006454:91283..95391 +
NSK006454tmRNANSK006454t:91283..95391 +
NSK006455geneNSK006455:94883..95083 +
NSK006455tmRNANSK006455t:94883..95083 +
NSK006456geneNSK006456:95096..95809 -
NSK006456tmRNANSK006456t:95096..95809 -
NSK006457geneNSK006457:96055..98417 -
NSK006457tmRNANSK006457t:96055..98417 -
NSK006458geneNSK006458:98541..100464 +
NSK006458tmRNANSK006458t:98541..100464 +
NSK006459geneNSK006459:100473..101438 +
NSK006459tmRNANSK006459t:100473..101438 +
NSK006460geneNSK006460:100514..101532 +
NSK006460tmRNANSK006460t:100514..101532 +
NSK006461geneNSK006461:102191..103978 +
NSK006461tmRNANSK006461t:102191..103978 +
NSK006462geneNSK006462:104092..104329 -
NSK006462tmRNANSK006462t:104092..104329 -
NSK006463geneNSK006463:104503..105519 -
NSK006463tmRNANSK006463t:104503..105519 -
NSK006464geneNSK006464:105101..105783 -
NSK006464tmRNANSK006464t:105101..105783 -
NSK006465geneNSK006465:107929..111715 -
NSK006465tmRNANSK006465t:107929..111715 -
NSK006466geneNSK006466:113820..116557 +
NSK006466tmRNANSK006466t:113820..116557 +
NSK006467geneNSK006467:117675..120830 -
NSK006467tmRNANSK006467t:117675..120830 -
NSK006468geneNSK006468:122562..124036 -
NSK006468tmRNANSK006468t:122562..124036 -
NSK006469geneNSK006469:123695..124331 +
NSK006469tmRNANSK006469t:123695..124331 +
NSK006470geneNSK006470:124873..126541 +
NSK006470tmRNANSK006470t:124873..126541 +
NSK006471geneNSK006471:127705..128635 +
NSK006471tmRNANSK006471t:127705..128635 +
NSK006472geneNSK006472:128770..129399 -
NSK006472tmRNANSK006472t:128770..129399 -
NSK006473geneNSK006473:128788..129347 -
NSK006473tmRNANSK006473t:128788..129347 -
NSK006474geneNSK006474:129738..130811 +
NSK006474tmRNANSK006474t:129738..130811 +
NSK006475geneNSK006475:131374..136123 -
NSK006475tmRNANSK006475t:131374..136123 -
NSK006476geneNSK006476:136610..136953 +
NSK006476tmRNANSK006476t:136610..136953 +
NSK006477geneNSK006477:136926..137188 -
NSK006477tmRNANSK006477t:136926..137188 -
NSK006478geneNSK006478:137756..147998 -
NSK006478tmRNANSK006478t:137756..147998 -
NSK006479geneNSK006479:149208..156217 -
NSK006479tmRNANSK006479t:149208..156217 -
nonsR001syntenic_regionnonsR001:26545..156217 -
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications