jgi.p|Nanoce1779_2|634025, gene_10490 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|634025
Unique Namegene_10490
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_52:71248..72855 -

Link to JBrowse

Properties
Property NameValue
TranscriptId634111
ProteinId634025
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:71248..72855 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009103lipopolysaccharide biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL074ncniL074Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634025mRNA_10490-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634025mRNA_10490Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|634025

>mRNA_10490-protein ID=mRNA_10490-protein|Name=jgi.p|Nanoce1779_2|634025|organism=Nannochloropsis oceanica|type=polypeptide|length=346bp
MTMLGLKAHPRHLPNTASSILLFTPRTFITTFLILSFSWTLFLVALQQFS
ERRCSQLRPDLTLFAGHINYELPFPVYYINMEQSSGRRERMELDFGGIWD
LRRSPAVDGMDIDIVLQLMGRMNYDDIHSSISDDRRQGTINGAELGCVLS
HLTAIRRAYLEGNEIAMIVEDDITPLLMPFWTNSLVDVINEAGNYSAGTW
DMVQMAWIWGMDETLYDRDAHNFGPDRHLLQTRFQFGTSAYVISKGGMGK
ILNAYFTDRTETGQIRLRKGGDQAELYIYGAISNLYVAMPSFFTIEGSDT
TISVGEESQRRLSSHRESNSIHIKTTFDLFHEMKKEKLISKENLE*
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Synonyms
Publications