jgi.p|Nanoce1779_2|675694, gene_11835 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|675694
Unique Namegene_11835
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_138:30236..33368 +

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Properties
Property NameValue
TranscriptId675780
ProteinId675694
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_138supercontigscaffold_138:30236..33368 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0004177aminopeptidase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL017ncniL017Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00140NO13G00140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675694mRNA_11835-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675694mRNA_11835Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|675694

>mRNA_11835-protein ID=mRNA_11835-protein|Name=jgi.p|Nanoce1779_2|675694|organism=Nannochloropsis oceanica|type=polypeptide|length=351bp
MLAFKVEDGLTVKHREGSLEVIPAWGPGGKEGGRGVEKVVLFVRKGGLTV
AEPFVLSSLPNLLPPSNTYVLVDFEGGANTAANPTLAAFSWAMGTYKMDR
YKQKPAKKEGGGEGGGDDALKRKARLVWPKGADKEEVQAKVGSTFLVRDM
VNMPAECMGPPQLQQTAEMVAALFGAKAKVIIGDDLLKENYPMIHSVGRA
ADIGREPRLIDLTWGEVDRPKITLVGKGVCYDTGGLDIKPGNSMAGMKKD
MAGAAQILGLAYMIMASKLPIRLRILGLAYMIMASKLPIRLRILGLAYMI
MASKLPIRLRILGLAYMIMASKLPIRLRVLIPAVENSVDARAYRNGDIIQ
A
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Synonyms
Publications