jgi.p|Nanoce1779_2|593199, gene_5938 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|593199
Unique Namegene_5938
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:118307..120960 -

Link to JBrowse

Properties
Property NameValue
TranscriptId593285
ProteinId593199
Product nameDENN (AEX-3) domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:118307..120960 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00610NO16G00610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593199mRNA_5938-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593199mRNA_5938Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|593199

>mRNA_5938-protein ID=mRNA_5938-protein|Name=jgi.p|Nanoce1779_2|593199|organism=Nannochloropsis oceanica|type=polypeptide|length=834bp
MEGRTAGGQLKGGEGRMPLQSCPEIAAVESLESLPGPAESSRTTTSVTPF
PTIVADNADANASRSMTSTTHSSFSSDDASGHSRGGSSISSSSSFTEQQQ
QPAFGGNAIQQKQERQSSVKHEMSMGYRIERGNEAQEQVKAIADSIFSSP
RKKCGGNLNETQVPMLAAGEARVEREEGSLGFQQLARLPVVDETMEEQEE
ASPAFGAGKALIDLSPSSSPHAQQPQEAHKEEQQQQEQQAQFSCWDTNSH
HNTSIESRTSGNSKDGGKVIGEDDDDDESLIALVEADFQDALIQSYETFA
RDSFTTNYPTTFEALPTVIDTSGVGDEDIAIVPRPSYQQTLPSSTVCNPP
RRGTTVGDYNGVTAVQQHRDRRGSNGNSVGTRDGLMAAAAKALPTTLTYA
PYGFCLISRFSFINSLRAPLAALFDPKNTRHPSALRAIQDYLAAQSPIHI
PLNAADRHESLCLLQTAPAPSAISPHVAAAAAALSPSGLLSPFLAKPAPT
STSAAINSHPATLLTPSPPQHQHQYRFFTQIDFELETLFQCLNPRNLVLV
FLALLLECKVLLISERLTLLTIAGEGLRFLLHPLKWCHVYVPLVPEVMID
HVIGCPTPFIMGLHRKTYLQRQDDFPADIVQVDLDNDYVEAPAKDLNRKN
APFAGPLARNFERLASPATALSDSCHWAPYTQGPAHAMTNFRSSNNSSSK
NSGLPSSPVSAAANGAAPGPWLALQMRDMRAALLVLRDFVEGLLMGIEDS
CYCIYTETEMTILFDETLFGHICGPAELLLITPNEPDTDALPHSPHLPPA
PPNDATAQEDFVLRFCRTQAFSNALMKGLQRDE*
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Synonyms
Publications