jgi.p|Nanoce1779_2|597554, mRNA_6635 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|597554
Unique Name	mRNA_6635
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4572
Alignment location	scaffold_18:328484..333055 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	597640
Track	FilteredModels2
ProteinId	597554

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_18	supercontig	scaffold_18:328484..333055 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|597554	gene_6635	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|597554	mRNA_6635-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6635	CDS_6635	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_18:328484..333055+
coding sequence from alignment at scaffold_18:328484..333055+

mRNA sequence

>mRNA_6635 ID=mRNA_6635|Name=jgi.p|Nanoce1779_2|597554|organism=Nannochloropsis oceanica|type=mRNA|length=4572bp
AAATACGACAGACATGGCATCTGATGCAGAGTCTATGAGACGCTCGCCTC
CGCCAGCAGCACCACCATCTTCGCCAGCGCCATCGGCCCCCCCACCACCG
CCAGCAGACCTCTACGAGCATCTCACCCCATGGCAGCAATTGAGTTTCAG
TTTTGTCATACCCATCATACGCTATGGGACCTACAAGTCGCTTCAGCAAG
AAGATCTTTTACCCGTGCCCGAGCAGGATCGTGCTGCCCGGGTTATGGAA
CGCTTGGAGAAAGAATGGGCTGTGGAGCTGCAGACAAAACAACGCCCAAG
CCTCAATCGCGCCTTGTACCGGACCCACCGTCGAGCTTTCTACGTCAGTG
GTGTGTTACTTTTTATAGAGTATGCACTGATGCTTGCCAAGCCTGTGGTG
CTGCGTTATTTGCTTTCGTGGTTAAAGGGCGATGTGGCGACCGAGGCTGA
GGTGGGCTCTACTGGGCATTGGTGTTATGGCATTGGAGTAGCCCTTGGTC
TTGCATGCTTGAACTTTATGCAGACATTGATTCATCACCGCGCGTTTATG
TTGACAATTCGGACGGGATGGCGATTGCGGACGTCGGTCCAGGGGCTATT
GTATAAGAAAATTTTAAAATTGGACAGTCGGTGGCAGAGCAGAGTGGGCA
CAGGGCAGATCGTCTCGACCCTTGCGAATGATACGCAAAGGTATGAAGAT
TGTGCACCGAGCATACATTTCCTGTGGGTCGCCCCCTTGATGGCATTTGC
GGGCCTTGGGCTGTTAATCATGTACGTGGGGATTCGGCCTGCCGCTGCTG
GGTGTGTGGTGACCGTGGGCATCATTCCCTTGCAGGTGTGGTGTGGAAGG
CGGGTAGGACACGCGCGGCGAGTCACAGCAGAGAGGACGGATAGACGCGT
GAGACTCTTGTCAGAGGTCTTGTCAGGAATTCAGACGGTGAAGGCGTTCG
TGTGGGAGGCGCCTTTCAGAGCAAGTATTTCGACAGCCCGTGCGTTAGAG
AGGGAGTCGCTTGGATGGGCCGCTGAAATGCGGGCCATCACGATGGGTAT
TTTTTTCGTCGCGCCGACATTTGCGGCTTCTGTGACATTCCTGACATTTT
GGGGGTTGGGAAATCGGATGGAACTTCCAATCGTGTTCGCGGTGATGACG
TTGCTGCAAACCTTGAGAGAGTGCGCGAGGTGGATTCCGCGGAGTATAGA
GCAGGTGTCCGAGGCGCAGGTAGCGACTAGGCGGGTTCAGTCTTTGTTGG
AGTTACCAGTGGTTGGAGAAGGGAGGAAGGAAAGAGCAAAGGAAGATCCG
TTAAAGGCGGAGGAAAGTGTAGTGAAGGTCGAGAACGTCGTCGAGATCCA
TGACAGTGATTTTAGCTGGACAGGCGAGCAAAAGCAGGAGCAAGGGGAAG
ATAAACATGATGGCCGTACATCTTATCCCATGCGGGCTGTATTCCACCTA
CAGCATCTCAGCCTGTCCATCAAGCCAGGAGAGCTTCTCATCGTGACAGG
TCCTGTCGGAAGTGGGAAGTCAACGTTGCTGGACGTGATTTTGGGGGAGG
TGTCGTGTGTTCATGGTCCTGGAGTGCAGTTGTGGGAAGGAACAAAGATG
GCATATTGCTCACAGCAGTCGTGGATCGAAGTGGGTACTGTTCGGGACAA
TATTACTTTTGGCGCTGCGCCCTCCAAGCAGCCGACGGCAATGACGACGG
GCACACCCGCTACGATTATCACTACCAGTACAAGCAGGAGCGGCAGCAGG
AGCGGCAGTAGGAGCAGTAATTGCGGTAGTACGTCAATCTTCAAGCCGGT
GTTGGACACAAAACGATACATGCGCGCTCTAAAAGCTTGTGCGCTCAATC
ACGATTTGGGAAATCTGGCGAGCGGGGATCTCACGGAGATCGGAGAGATG
GGAGTTAATTTAAGTGGGGGACAACGGGCCCGCGTGGCGTTGGCGCGGGC
AGTGTATGCAGATGCAGATTTATATTTGCTTGATGATGTGTTGTCGGCTG
TGGATGCACAGGTGTCGAAACATATTTTCCATGATTGTATTCGCGGGCTG
TTGCTCAAGGAGAAGAAAGCCGTGATCTTGGTGACGCATCAACTCCAGTA
CTTGCCCTATGCGACACGGGTGTGTTTATTGGATAAAGAAGGAGAGATAG
TTGCTCCGTGCGCGCCTTTGGAGGAGTTGAGGGTTATGGTGCCTGACTGG
AAGGGCCTGATGCAGGAAAGGTTGGGCGGAGCAGCGGTGGCGGTGGAGGG
AAGGGGCAAGAGCGCTCAGAGAGGTGGAGAAGAGGAGGAGATTGAGGATG
AAAGAGATAAAGAAGGCAGAGAGGGCGAGAGCAGAAGTATTATTGGTGTT
AAAGATGCCAGCGATATCGAGAAGTCCTCAGATCTTGTCGCTTCCTCCCC
AGCGCTCTTTCAAAGCACATGCCACGTGTCGGCTGGCTACATGGTGGCCG
AGGATCGGGTGCAGGGACACGTCCATGGAGATACGTACGTAAATTATTTG
CGCAGCGGTGGCATGGGTGCAGGTATGGGCATTATACTGTTGCTTTTGAT
GAGTCAAGGCGTGCAGACCCTGACAGATTTTTGGCTGAAATTTTGGACAG
CTTCTCAGGACGCACGCTCTGCCCGGGACAGTGCTTATTATTACCCGCGC
ACATACGCCATCCTCGTTGCCGTATGTGTGGTGTTGGGCTTGCTGCGCGC
TGACCTCTTCTTTCGCTTTGCTCTCCGAGCGAGCAGTAGTCTACACGATC
AAGCTTTGGAAGCTGTGCTGGCTGCGCCGCTGGCCTTTTTCAATTCCAAT
CAGCGCGGGCGAATTTTGAACAAATTTGCCAAAGATCTGGACTCGGCGGA
CGACCTGTTGCCGTATACTCTCTTCGATTTCTTGCAGTCTGCGGGATCAT
GTCTGGCTGCCGTGGTAGTCTGCTGTATTGCCGTCCCGTACCTGCTTCTG
ATTGTGGCTCCACTCTTGTACTTCTTTCGCAAGTACCGTCGAGAGTTCGT
CAAGAGTGCTCGGGAGGTCAAGCGCTTGGATGCTATCACACGCAGCCCTT
TGTTTGCGGATGTCTCATCGTCTTTACAAGGTGCGAAAGTTATCCGCGCT
TTTCGAGCTGAGACCGCTATGGAGCAGCGCTTCCTACGGCGACTCGACGA
AAATGGGAAGTGCACATTTTTGTTCATCGTCCTGTCGCGCTACCTCGGCT
TTCGGCTTGATATTCTCTGTGCATGGTTCCTGGCTGTCCTCTGCCTTATG
ACCGTGGCCCTACACGCGTCGCTCGATCCTGGGATGTTGGGATTATCGTT
GACATATGCCTTGGTCTTGTGTGGGGCCTTCCAGTGGACCGTCCGCCAGA
GCGCTCAGACCGAGACCTTATTCACTAGTGTAGAACGTTTGGACTTCTAT
ACACGATTGCCCTCAGAACAAGACGAGGACGAGCAATCTGGCGTATTTCC
TATCTCAGACAAGAAGATATTTGGGCAGCTTTCTCCAAGCTGGCCACGAC
AAGGCGAGATTTTGGTCAGGAACCTCAACGTACGCTATCGTGAGGATTTG
CCGCTGGTTTTGACTGATATCAACTTTGTCATTCGCGCCGGTCAGAAGGT
GGGAATCGTTGGTCGTACTGGCTCGGGTAAGAGCTCTTTCCTCGCGGCTT
TATTGCGTCTGAACCAGATTGTCGGTGGTGATATTGTGTTAGACGGCATA
AGCCTCCCGAGCCTTCCCCGTGCCGATGCCCGCCGGTGTGTGGCGTGGAT
TCCGCAACAACCTGATTTGTTCGCCGGTACCCTTCGTTTAAATCTAGATC
CATTTTTGAACCACAATGATGCCGAGCTACATGCAGCCTTGGAGAATGTG
CACCTGTCCCTCCCGCTCGATATGCCTGTGGCGGAAGGAGGGGCCAACCT
GTCGGTGGGCACGCGCCAGCTGCTGTCCCTCGCGCGGGCTGTCTTGCTCC
GTCGCAAGATCCTGCTGATGGATGAGGCAACTGCCTCCGTGAGCTTCATC
GAGGATAAACGCATCCAGGCTACGCTGCGTACGGCTCCGTGTTTTCAGGA
TTGCACCACGGTGACCATCGCGCATCGGATTGAGTCGATCATTATGTCGG
ATTTAATTTTGGTGTTTGCAGATGGGAGATGTGTGGAGCAAGGGACACCG
CAGGTGCTGATGTCGAGGGAATGCTCTCTTTTTGGAGCATTGGTCCGAGA
GGCGCAAAGCGGGGCTACGCATGGGGATTTGGCAAAAAAGTATATAATGA
AAAAGTGATGGAGTGTTAATAAAGGATGAAAGGAATCCGCTTTGGCTTGA
CATCGCGTATTGACGAAAGAGATACACAGAGACTCCCCGGCCTTTGGACA
AGATACGACAAGTCTTGTTCAGCAGGATGTATTATACAGTAGAATATTGA
AAGAAAAGGGAAAAAGCACAAGTCCAGGACAAGGCGGCGACGGAGATTGC
TCGTATCGAAAGCGACCGAAAGTTGTCAGAGCTTTTCTGGAAGGCCGAGG
TAGAGCGGTACAAGCACGACCTCCAACTTGCGCACACGGAAGACTATGAG
CCCTATCAGGCGGCAGTTTCGA

protein sequence of jgi.p|Nanoce1779_2|597554

>mRNA_6635-protein ID=mRNA_6635-protein|Name=jgi.p|Nanoce1779_2|597554|organism=Nannochloropsis oceanica|type=polypeptide|length=1415bp
MASDAESMRRSPPPAAPPSSPAPSAPPPPPADLYEHLTPWQQLSFSFVIP
IIRYGTYKSLQQEDLLPVPEQDRAARVMERLEKEWAVELQTKQRPSLNRA
LYRTHRRAFYVSGVLLFIEYALMLAKPVVLRYLLSWLKGDVATEAEVGST
GHWCYGIGVALGLACLNFMQTLIHHRAFMLTIRTGWRLRTSVQGLLYKKI
LKLDSRWQSRVGTGQIVSTLANDTQRYEDCAPSIHFLWVAPLMAFAGLGL
LIMYVGIRPAAAGCVVTVGIIPLQVWCGRRVGHARRVTAERTDRRVRLLS
EVLSGIQTVKAFVWEAPFRASISTARALERESLGWAAEMRAITMGIFFVA
PTFAASVTFLTFWGLGNRMELPIVFAVMTLLQTLRECARWIPRSIEQVSE
AQVATRRVQSLLELPVVGEGRKERAKEDPLKAEESVVKVENVVEIHDSDF
SWTGEQKQEQGEDKHDGRTSYPMRAVFHLQHLSLSIKPGELLIVTGPVGS
GKSTLLDVILGEVSCVHGPGVQLWEGTKMAYCSQQSWIEVGTVRDNITFG
AAPSKQPTAMTTGTPATIITTSTSRSGSRSGSRSSNCGSTSIFKPVLDTK
RYMRALKACALNHDLGNLASGDLTEIGEMGVNLSGGQRARVALARAVYAD
ADLYLLDDVLSAVDAQVSKHIFHDCIRGLLLKEKKAVILVTHQLQYLPYA
TRVCLLDKEGEIVAPCAPLEELRVMVPDWKGLMQERLGGAAVAVEGRGKS
AQRGGEEEEIEDERDKEGREGESRSIIGVKDASDIEKSSDLVASSPALFQ
STCHVSAGYMVAEDRVQGHVHGDTYVNYLRSGGMGAGMGIILLLLMSQGV
QTLTDFWLKFWTASQDARSARDSAYYYPRTYAILVAVCVVLGLLRADLFF
RFALRASSSLHDQALEAVLAAPLAFFNSNQRGRILNKFAKDLDSADDLLP
YTLFDFLQSAGSCLAAVVVCCIAVPYLLLIVAPLLYFFRKYRREFVKSAR
EVKRLDAITRSPLFADVSSSLQGAKVIRAFRAETAMEQRFLRRLDENGKC
TFLFIVLSRYLGFRLDILCAWFLAVLCLMTVALHASLDPGMLGLSLTYAL
VLCGAFQWTVRQSAQTETLFTSVERLDFYTRLPSEQDEDEQSGVFPISDK
KIFGQLSPSWPRQGEILVRNLNVRYREDLPLVLTDINFVIRAGQKVGIVG
RTGSGKSSFLAALLRLNQIVGGDIVLDGISLPSLPRADARRCVAWIPQQP
DLFAGTLRLNLDPFLNHNDAELHAALENVHLSLPLDMPVAEGGANLSVGT
RQLLSLARAVLLRRKILLMDEATASVSFIEDKRIQATLRTAPCFQDCTTV
TIAHRIESIIMSDLILVFADGRCVEQGTPQVLMSRECSLFGALVREAQSG
ATHGDLAKKYIMKK*

mRNA from alignment at scaffold_18:328484..333055+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6635 ID=mRNA_6635|Name=jgi.p|Nanoce1779_2|597554|organism=Nannochloropsis oceanica|type=mRNA|length=4572bp|location=Sequence derived from alignment at scaffold_18:328484..333055+ (Nannochloropsis oceanica)
AAATACGACAGACATGGCATCTGATGCAGAGTCTATGAGACGCTCGCCTC
CGCCAGCAGCACCACCATCTTCGCCAGCGCCATCGGCCCCCCCACCACCG
CCAGCAGACCTCTACGAGCATCTCACCCCATGGCAGCAATTGAGTTTCAG
TTTTGTCATACCCATCATACGCTATGGGACCTACAAGTCGCTTCAGCAAG
AAGATCTTTTACCCGTGCCCGAGCAGGATCGTGCTGCCCGGGTTATGGAA
CGCTTGGAGAAAGAATGGGCTGTGGAGCTGCAGACAAAACAACGCCCAAG
CCTCAATCGCGCCTTGTACCGGACCCACCGTCGAGCTTTCTACGTCAGTG
GTGTGTTACTTTTTATAGAGTATGCACTGATGCTTGCCAAGCCTGTGGTG
CTGCGTTATTTGCTTTCGTGGTTAAAGGGCGATGTGGCGACCGAGGCTGA
GGTGGGCTCTACTGGGCATTGGTGTTATGGCATTGGAGTAGCCCTTGGTC
TTGCATGCTTGAACTTTATGCAGACATTGATTCATCACCGCGCGTTTATG
TTGACAATTCGGACGGGATGGCGATTGCGGACGTCGGTCCAGGGGCTATT
GTATAAGAAAATTTTAAAATTGGACAGTCGGTGGCAGAGCAGAGTGGGCA
CAGGGCAGATCGTCTCGACCCTTGCGAATGATACGCAAAGGTATGAAGAT
TGTGCACCGAGCATACATTTCCTGTGGGTCGCCCCCTTGATGGCATTTGC
GGGCCTTGGGCTGTTAATCATGTACGTGGGGATTCGGCCTGCCGCTGCTG
GGTGTGTGGTGACCGTGGGCATCATTCCCTTGCAGGTGTGGTGTGGAAGG
CGGGTAGGACACGCGCGGCGAGTCACAGCAGAGAGGACGGATAGACGCGT
GAGACTCTTGTCAGAGGTCTTGTCAGGAATTCAGACGGTGAAGGCGTTCG
TGTGGGAGGCGCCTTTCAGAGCAAGTATTTCGACAGCCCGTGCGTTAGAG
AGGGAGTCGCTTGGATGGGCCGCTGAAATGCGGGCCATCACGATGGGTAT
TTTTTTCGTCGCGCCGACATTTGCGGCTTCTGTGACATTCCTGACATTTT
GGGGGTTGGGAAATCGGATGGAACTTCCAATCGTGTTCGCGGTGATGACG
TTGCTGCAAACCTTGAGAGAGTGCGCGAGGTGGATTCCGCGGAGTATAGA
GCAGGTGTCCGAGGCGCAGGTAGCGACTAGGCGGGTTCAGTCTTTGTTGG
AGTTACCAGTGGTTGGAGAAGGGAGGAAGGAAAGAGCAAAGGAAGATCCG
TTAAAGGCGGAGGAAAGTGTAGTGAAGGTCGAGAACGTCGTCGAGATCCA
TGACAGTGATTTTAGCTGGACAGGCGAGCAAAAGCAGGAGCAAGGGGAAG
ATAAACATGATGGCCGTACATCTTATCCCATGCGGGCTGTATTCCACCTA
CAGCATCTCAGCCTGTCCATCAAGCCAGGAGAGCTTCTCATCGTGACAGG
TCCTGTCGGAAGTGGGAAGTCAACGTTGCTGGACGTGATTTTGGGGGAGG
TGTCGTGTGTTCATGGTCCTGGAGTGCAGTTGTGGGAAGGAACAAAGATG
GCATATTGCTCACAGCAGTCGTGGATCGAAGTGGGTACTGTTCGGGACAA
TATTACTTTTGGCGCTGCGCCCTCCAAGCAGCCGACGGCAATGACGACGG
GCACACCCGCTACGATTATCACTACCAGTACAAGCAGGAGCGGCAGCAGG
AGCGGCAGTAGGAGCAGTAATTGCGGTAGTACGTCAATCTTCAAGCCGGT
GTTGGACACAAAACGATACATGCGCGCTCTAAAAGCTTGTGCGCTCAATC
ACGATTTGGGAAATCTGGCGAGCGGGGATCTCACGGAGATCGGAGAGATG
GGAGTTAATTTAAGTGGGGGACAACGGGCCCGCGTGGCGTTGGCGCGGGC
AGTGTATGCAGATGCAGATTTATATTTGCTTGATGATGTGTTGTCGGCTG
TGGATGCACAGGTGTCGAAACATATTTTCCATGATTGTATTCGCGGGCTG
TTGCTCAAGGAGAAGAAAGCCGTGATCTTGGTGACGCATCAACTCCAGTA
CTTGCCCTATGCGACACGGGTGTGTTTATTGGATAAAGAAGGAGAGATAG
TTGCTCCGTGCGCGCCTTTGGAGGAGTTGAGGGTTATGGTGCCTGACTGG
AAGGGCCTGATGCAGGAAAGGTTGGGCGGAGCAGCGGTGGCGGTGGAGGG
AAGGGGCAAGAGCGCTCAGAGAGGTGGAGAAGAGGAGGAGATTGAGGATG
AAAGAGATAAAGAAGGCAGAGAGGGCGAGAGCAGAAGTATTATTGGTGTT
AAAGATGCCAGCGATATCGAGAAGTCCTCAGATCTTGTCGCTTCCTCCCC
AGCGCTCTTTCAAAGCACATGCCACGTGTCGGCTGGCTACATGGTGGCCG
AGGATCGGGTGCAGGGACACGTCCATGGAGATACGTACGTAAATTATTTG
CGCAGCGGTGGCATGGGTGCAGGTATGGGCATTATACTGTTGCTTTTGAT
GAGTCAAGGCGTGCAGACCCTGACAGATTTTTGGCTGAAATTTTGGACAG
CTTCTCAGGACGCACGCTCTGCCCGGGACAGTGCTTATTATTACCCGCGC
ACATACGCCATCCTCGTTGCCGTATGTGTGGTGTTGGGCTTGCTGCGCGC
TGACCTCTTCTTTCGCTTTGCTCTCCGAGCGAGCAGTAGTCTACACGATC
AAGCTTTGGAAGCTGTGCTGGCTGCGCCGCTGGCCTTTTTCAATTCCAAT
CAGCGCGGGCGAATTTTGAACAAATTTGCCAAAGATCTGGACTCGGCGGA
CGACCTGTTGCCGTATACTCTCTTCGATTTCTTGCAGTCTGCGGGATCAT
GTCTGGCTGCCGTGGTAGTCTGCTGTATTGCCGTCCCGTACCTGCTTCTG
ATTGTGGCTCCACTCTTGTACTTCTTTCGCAAGTACCGTCGAGAGTTCGT
CAAGAGTGCTCGGGAGGTCAAGCGCTTGGATGCTATCACACGCAGCCCTT
TGTTTGCGGATGTCTCATCGTCTTTACAAGGTGCGAAAGTTATCCGCGCT
TTTCGAGCTGAGACCGCTATGGAGCAGCGCTTCCTACGGCGACTCGACGA
AAATGGGAAGTGCACATTTTTGTTCATCGTCCTGTCGCGCTACCTCGGCT
TTCGGCTTGATATTCTCTGTGCATGGTTCCTGGCTGTCCTCTGCCTTATG
ACCGTGGCCCTACACGCGTCGCTCGATCCTGGGATGTTGGGATTATCGTT
GACATATGCCTTGGTCTTGTGTGGGGCCTTCCAGTGGACCGTCCGCCAGA
GCGCTCAGACCGAGACCTTATTCACTAGTGTAGAACGTTTGGACTTCTAT
ACACGATTGCCCTCAGAACAAGACGAGGACGAGCAATCTGGCGTATTTCC
TATCTCAGACAAGAAGATATTTGGGCAGCTTTCTCCAAGCTGGCCACGAC
AAGGCGAGATTTTGGTCAGGAACCTCAACGTACGCTATCGTGAGGATTTG
CCGCTGGTTTTGACTGATATCAACTTTGTCATTCGCGCCGGTCAGAAGGT
GGGAATCGTTGGTCGTACTGGCTCGGGTAAGAGCTCTTTCCTCGCGGCTT
TATTGCGTCTGAACCAGATTGTCGGTGGTGATATTGTGTTAGACGGCATA
AGCCTCCCGAGCCTTCCCCGTGCCGATGCCCGCCGGTGTGTGGCGTGGAT
TCCGCAACAACCTGATTTGTTCGCCGGTACCCTTCGTTTAAATCTAGATC
CATTTTTGAACCACAATGATGCCGAGCTACATGCAGCCTTGGAGAATGTG
CACCTGTCCCTCCCGCTCGATATGCCTGTGGCGGAAGGAGGGGCCAACCT
GTCGGTGGGCACGCGCCAGCTGCTGTCCCTCGCGCGGGCTGTCTTGCTCC
GTCGCAAGATCCTGCTGATGGATGAGGCAACTGCCTCCGTGAGCTTCATC
GAGGATAAACGCATCCAGGCTACGCTGCGTACGGCTCCGTGTTTTCAGGA
TTGCACCACGGTGACCATCGCGCATCGGATTGAGTCGATCATTATGTCGG
ATTTAATTTTGGTGTTTGCAGATGGGAGATGTGTGGAGCAAGGGACACCG
CAGGTGCTGATGTCGAGGGAATGCTCTCTTTTTGGAGCATTGGTCCGAGA
GGCGCAAAGCGGGGCTACGCATGGGGATTTGGCAAAAAAGTATATAATGA
AAAAGTGATGGAGTGTTAATAAAGGATGAAAGGAATCCGCTTTGGCTTGA
CATCGCGTATTGACGAAAGAGATACACAGAGACTCCCCGGCCTTTGGACA
AGATACGACAAGTCTTGTTCAGCAGGATGTATTATACAGTAGAATATTGA
AAGAAAAGGGAAAAAGCACAAGTCCAGGACAAGGCGGCGACGGAGATTGC
TCGTATCGAAAGCGACCGAAAGTTGTCAGAGCTTTTCTGGAAGGCCGAGG
TAGAGCGGTACAAGCACGACCTCCAACTTGCGCACACGGAAGACTATGAG
CCCTATCAGGCGGCAGTTTCGA

Coding sequence (CDS) from alignment at scaffold_18:328484..333055+

>mRNA_6635 ID=mRNA_6635|Name=jgi.p|Nanoce1779_2|597554|organism=Nannochloropsis oceanica|type=CDS|length=4245bp|location=Sequence derived from alignment at scaffold_18:328484..333055+ (Nannochloropsis oceanica)
ATGGCATCTGATGCAGAGTCTATGAGACGCTCGCCTCCGCCAGCAGCACC
ACCATCTTCGCCAGCGCCATCGGCCCCCCCACCACCGCCAGCAGACCTCT
ACGAGCATCTCACCCCATGGCAGCAATTGAGTTTCAGTTTTGTCATACCC
ATCATACGCTATGGGACCTACAAGTCGCTTCAGCAAGAAGATCTTTTACC
CGTGCCCGAGCAGGATCGTGCTGCCCGGGTTATGGAACGCTTGGAGAAAG
AATGGGCTGTGGAGCTGCAGACAAAACAACGCCCAAGCCTCAATCGCGCC
TTGTACCGGACCCACCGTCGAGCTTTCTACGTCAGTGGTGTGTTACTTTT
TATAGAGTATGCACTGATGCTTGCCAAGCCTGTGGTGCTGCGTTATTTGC
TTTCGTGGTTAAAGGGCGATGTGGCGACCGAGGCTGAGGTGGGCTCTACT
GGGCATTGGTGTTATGGCATTGGAGTAGCCCTTGGTCTTGCATGCTTGAA
CTTTATGCAGACATTGATTCATCACCGCGCGTTTATGTTGACAATTCGGA
CGGGATGGCGATTGCGGACGTCGGTCCAGGGGCTATTGTATAAGAAAATT
TTAAAATTGGACAGTCGGTGGCAGAGCAGAGTGGGCACAGGGCAGATCGT
CTCGACCCTTGCGAATGATACGCAAAGGTATGAAGATTGTGCACCGAGCA
TACATTTCCTGTGGGTCGCCCCCTTGATGGCATTTGCGGGCCTTGGGCTG
TTAATCATGTACGTGGGGATTCGGCCTGCCGCTGCTGGGTGTGTGGTGAC
CGTGGGCATCATTCCCTTGCAGGTGTGGTGTGGAAGGCGGGTAGGACACG
CGCGGCGAGTCACAGCAGAGAGGACGGATAGACGCGTGAGACTCTTGTCA
GAGGTCTTGTCAGGAATTCAGACGGTGAAGGCGTTCGTGTGGGAGGCGCC
TTTCAGAGCAAGTATTTCGACAGCCCGTGCGTTAGAGAGGGAGTCGCTTG
GATGGGCCGCTGAAATGCGGGCCATCACGATGGGTATTTTTTTCGTCGCG
CCGACATTTGCGGCTTCTGTGACATTCCTGACATTTTGGGGGTTGGGAAA
TCGGATGGAACTTCCAATCGTGTTCGCGGTGATGACGTTGCTGCAAACCT
TGAGAGAGTGCGCGAGGTGGATTCCGCGGAGTATAGAGCAGGTGTCCGAG
GCGCAGGTAGCGACTAGGCGGGTTCAGTCTTTGTTGGAGTTACCAGTGGT
TGGAGAAGGGAGGAAGGAAAGAGCAAAGGAAGATCCGTTAAAGGCGGAGG
AAAGTGTAGTGAAGGTCGAGAACGTCGTCGAGATCCATGACAGTGATTTT
AGCTGGACAGGCGAGCAAAAGCAGGAGCAAGGGGAAGATAAACATGATGG
CCGTACATCTTATCCCATGCGGGCTGTATTCCACCTACAGCATCTCAGCC
TGTCCATCAAGCCAGGAGAGCTTCTCATCGTGACAGGTCCTGTCGGAAGT
GGGAAGTCAACGTTGCTGGACGTGATTTTGGGGGAGGTGTCGTGTGTTCA
TGGTCCTGGAGTGCAGTTGTGGGAAGGAACAAAGATGGCATATTGCTCAC
AGCAGTCGTGGATCGAAGTGGGTACTGTTCGGGACAATATTACTTTTGGC
GCTGCGCCCTCCAAGCAGCCGACGGCAATGACGACGGGCACACCCGCTAC
GATTATCACTACCAGTACAAGCAGGAGCGGCAGCAGGAGCGGCAGTAGGA
GCAGTAATTGCGGTAGTACGTCAATCTTCAAGCCGGTGTTGGACACAAAA
CGATACATGCGCGCTCTAAAAGCTTGTGCGCTCAATCACGATTTGGGAAA
TCTGGCGAGCGGGGATCTCACGGAGATCGGAGAGATGGGAGTTAATTTAA
GTGGGGGACAACGGGCCCGCGTGGCGTTGGCGCGGGCAGTGTATGCAGAT
GCAGATTTATATTTGCTTGATGATGTGTTGTCGGCTGTGGATGCACAGGT
GTCGAAACATATTTTCCATGATTGTATTCGCGGGCTGTTGCTCAAGGAGA
AGAAAGCCGTGATCTTGGTGACGCATCAACTCCAGTACTTGCCCTATGCG
ACACGGGTGTGTTTATTGGATAAAGAAGGAGAGATAGTTGCTCCGTGCGC
GCCTTTGGAGGAGTTGAGGGTTATGGTGCCTGACTGGAAGGGCCTGATGC
AGGAAAGGTTGGGCGGAGCAGCGGTGGCGGTGGAGGGAAGGGGCAAGAGC
GCTCAGAGAGGTGGAGAAGAGGAGGAGATTGAGGATGAAAGAGATAAAGA
AGGCAGAGAGGGCGAGAGCAGAAGTATTATTGGTGTTAAAGATGCCAGCG
ATATCGAGAAGTCCTCAGATCTTGTCGCTTCCTCCCCAGCGCTCTTTCAA
AGCACATGCCACGTGTCGGCTGGCTACATGGTGGCCGAGGATCGGGTGCA
GGGACACGTCCATGGAGATACGTACGTAAATTATTTGCGCAGCGGTGGCA
TGGGTGCAGGTATGGGCATTATACTGTTGCTTTTGATGAGTCAAGGCGTG
CAGACCCTGACAGATTTTTGGCTGAAATTTTGGACAGCTTCTCAGGACGC
ACGCTCTGCCCGGGACAGTGCTTATTATTACCCGCGCACATACGCCATCC
TCGTTGCCGTATGTGTGGTGTTGGGCTTGCTGCGCGCTGACCTCTTCTTT
CGCTTTGCTCTCCGAGCGAGCAGTAGTCTACACGATCAAGCTTTGGAAGC
TGTGCTGGCTGCGCCGCTGGCCTTTTTCAATTCCAATCAGCGCGGGCGAA
TTTTGAACAAATTTGCCAAAGATCTGGACTCGGCGGACGACCTGTTGCCG
TATACTCTCTTCGATTTCTTGCAGTCTGCGGGATCATGTCTGGCTGCCGT
GGTAGTCTGCTGTATTGCCGTCCCGTACCTGCTTCTGATTGTGGCTCCAC
TCTTGTACTTCTTTCGCAAGTACCGTCGAGAGTTCGTCAAGAGTGCTCGG
GAGGTCAAGCGCTTGGATGCTATCACACGCAGCCCTTTGTTTGCGGATGT
CTCATCGTCTTTACAAGGTGCGAAAGTTATCCGCGCTTTTCGAGCTGAGA
CCGCTATGGAGCAGCGCTTCCTACGGCGACTCGACGAAAATGGGAAGTGC
ACATTTTTGTTCATCGTCCTGTCGCGCTACCTCGGCTTTCGGCTTGATAT
TCTCTGTGCATGGTTCCTGGCTGTCCTCTGCCTTATGACCGTGGCCCTAC
ACGCGTCGCTCGATCCTGGGATGTTGGGATTATCGTTGACATATGCCTTG
GTCTTGTGTGGGGCCTTCCAGTGGACCGTCCGCCAGAGCGCTCAGACCGA
GACCTTATTCACTAGTGTAGAACGTTTGGACTTCTATACACGATTGCCCT
CAGAACAAGACGAGGACGAGCAATCTGGCGTATTTCCTATCTCAGACAAG
AAGATATTTGGGCAGCTTTCTCCAAGCTGGCCACGACAAGGCGAGATTTT
GGTCAGGAACCTCAACGTACGCTATCGTGAGGATTTGCCGCTGGTTTTGA
CTGATATCAACTTTGTCATTCGCGCCGGTCAGAAGGTGGGAATCGTTGGT
CGTACTGGCTCGGGTAAGAGCTCTTTCCTCGCGGCTTTATTGCGTCTGAA
CCAGATTGTCGGTGGTGATATTGTGTTAGACGGCATAAGCCTCCCGAGCC
TTCCCCGTGCCGATGCCCGCCGGTGTGTGGCGTGGATTCCGCAACAACCT
GATTTGTTCGCCGGTACCCTTCGTTTAAATCTAGATCCATTTTTGAACCA
CAATGATGCCGAGCTACATGCAGCCTTGGAGAATGTGCACCTGTCCCTCC
CGCTCGATATGCCTGTGGCGGAAGGAGGGGCCAACCTGTCGGTGGGCACG
CGCCAGCTGCTGTCCCTCGCGCGGGCTGTCTTGCTCCGTCGCAAGATCCT
GCTGATGGATGAGGCAACTGCCTCCGTGAGCTTCATCGAGGATAAACGCA
TCCAGGCTACGCTGCGTACGGCTCCGTGTTTTCAGGATTGCACCACGGTG
ACCATCGCGCATCGGATTGAGTCGATCATTATGTCGGATTTAATTTTGGT
GTTTGCAGATGGGAGATGTGTGGAGCAAGGGACACCGCAGGTGCTGATGT
CGAGGGAATGCTCTCTTTTTGGAGCATTGGTCCGAGAGGCGCAAAGCGGG
GCTACGCATGGGGATTTGGCAAAAAAGTATATAATGAAAAAGTGA

Synonyms

Publications